Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lsmem1Q3UQS2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsmem1Q3UQS2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsmem1Q3UQS2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lsmem1Q3UQS2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lsmem1Q3UQS2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsmem1Q3UQS2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsmem1Q3UQS2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsmem1Q3UQS2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsmem1Q3UQS2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lsmem1Q3UQS2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lsmem1Q3UQS2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lsmem1Q3UQS2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Lsmem1Q3UQS2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsmem1Q3UQS2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Lsmem1Q3UQS2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.45■□□□□ 0.86
Lsmem1Q3UQS2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lsmem1Q3UQS2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.45■□□□□ 0.86
Lsmem1Q3UQS2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsmem1Q3UQS2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lsmem1Q3UQS2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lsmem1Q3UQS2 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Lsmem1Q3UQS2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Lsmem1Q3UQS2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsmem1Q3UQS2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lsmem1Q3UQS2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.43■□□□□ 0.86
Lsmem1Q3UQS2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Lsmem1Q3UQS2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Lsmem1Q3UQS2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lsmem1Q3UQS2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lsmem1Q3UQS2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lsmem1Q3UQS2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lsmem1Q3UQS2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Lsmem1Q3UQS2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.39■□□□□ 0.86
Lsmem1Q3UQS2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lsmem1Q3UQS2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Lsmem1Q3UQS2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsmem1Q3UQS2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Lsmem1Q3UQS2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lsmem1Q3UQS2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lsmem1Q3UQS2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lsmem1Q3UQS2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms