Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cks1brtQ3UNC9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cks1brtQ3UNC9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cks1brtQ3UNC9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cks1brtQ3UNC9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cks1brtQ3UNC9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Cks1brtQ3UNC9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cks1brtQ3UNC9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cks1brtQ3UNC9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cks1brtQ3UNC9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1brtQ3UNC9 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1brtQ3UNC9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1brtQ3UNC9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1brtQ3UNC9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cks1brtQ3UNC9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cks1brtQ3UNC9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cks1brtQ3UNC9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC14.49□□□□□ -0.09
Cks1brtQ3UNC9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cks1brtQ3UNC9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cks1brtQ3UNC9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms