Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Iqck-206ENSMUST00000208658 2891 ntBASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smu1Q3UKJ7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smu1Q3UKJ7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smu1Q3UKJ7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Smu1Q3UKJ7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smu1Q3UKJ7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smu1Q3UKJ7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smu1Q3UKJ7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Smu1Q3UKJ7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smu1Q3UKJ7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smu1Q3UKJ7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smu1Q3UKJ7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smu1Q3UKJ7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smu1Q3UKJ7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smu1Q3UKJ7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Smu1Q3UKJ7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.24■□□□□ 0.67
Smu1Q3UKJ7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smu1Q3UKJ7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Smu1Q3UKJ7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.24■□□□□ 0.67
Smu1Q3UKJ7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.24■□□□□ 0.67
Smu1Q3UKJ7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smu1Q3UKJ7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smu1Q3UKJ7 Gm40881-201ENSMUST00000223397 166 ntBASIC19.23■□□□□ 0.67
Smu1Q3UKJ7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smu1Q3UKJ7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smu1Q3UKJ7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smu1Q3UKJ7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smu1Q3UKJ7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smu1Q3UKJ7 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.21■□□□□ 0.67
Smu1Q3UKJ7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smu1Q3UKJ7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.21■□□□□ 0.67
Smu1Q3UKJ7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smu1Q3UKJ7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smu1Q3UKJ7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smu1Q3UKJ7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smu1Q3UKJ7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smu1Q3UKJ7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smu1Q3UKJ7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms