Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sdk1Q3UH53 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdk1Q3UH53 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdk1Q3UH53 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sdk1Q3UH53 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sdk1Q3UH53 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdk1Q3UH53 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sdk1Q3UH53 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Gm13148-201ENSMUST00000118892 745 ntBASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sdk1Q3UH53 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sdk1Q3UH53 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sdk1Q3UH53 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sdk1Q3UH53 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.13■□□□□ 0.33
Sdk1Q3UH53 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdk1Q3UH53 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdk1Q3UH53 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sdk1Q3UH53 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdk1Q3UH53 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdk1Q3UH53 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sdk1Q3UH53 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sdk1Q3UH53 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdk1Q3UH53 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdk1Q3UH53 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdk1Q3UH53 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdk1Q3UH53 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdk1Q3UH53 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.12■□□□□ 0.33
Sdk1Q3UH53 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.12■□□□□ 0.33
Sdk1Q3UH53 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sdk1Q3UH53 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.11■□□□□ 0.33
Sdk1Q3UH53 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Gm8520-201ENSMUST00000186517 868 ntBASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Sdk1Q3UH53 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sdk1Q3UH53 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Sdk1Q3UH53 Gm7977-201ENSMUST00000193787 748 ntBASIC17.08■□□□□ 0.33
Sdk1Q3UH53 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.08■□□□□ 0.33
Sdk1Q3UH53 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sdk1Q3UH53 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sdk1Q3UH53 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sdk1Q3UH53 Gm27801-201ENSMUST00000184174 223 ntBASIC17.08■□□□□ 0.32
Sdk1Q3UH53 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.08■□□□□ 0.32
Sdk1Q3UH53 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms