Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC24.34■■□□□ 1.49
Col5a2Q3U962 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Col5a2Q3U962 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col5a2Q3U962 Reep4-203ENSMUST00000226563 1444 ntBASIC24.33■■□□□ 1.49
Col5a2Q3U962 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col5a2Q3U962 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col5a2Q3U962 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Col5a2Q3U962 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.32■■□□□ 1.48
Col5a2Q3U962 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.32■■□□□ 1.48
Col5a2Q3U962 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col5a2Q3U962 Gm12527-201ENSMUST00000117967 564 ntBASIC24.32■■□□□ 1.48
Col5a2Q3U962 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.32■■□□□ 1.48
Col5a2Q3U962 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Col5a2Q3U962 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Col5a2Q3U962 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Col5a2Q3U962 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col5a2Q3U962 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.31■■□□□ 1.48
Col5a2Q3U962 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.31■■□□□ 1.48
Col5a2Q3U962 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col5a2Q3U962 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col5a2Q3U962 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col5a2Q3U962 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col5a2Q3U962 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Col5a2Q3U962 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col5a2Q3U962 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.3■■□□□ 1.48
Col5a2Q3U962 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col5a2Q3U962 Gm10252-201ENSMUST00000209541 832 ntBASIC24.3■■□□□ 1.48
Col5a2Q3U962 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col5a2Q3U962 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col5a2Q3U962 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col5a2Q3U962 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col5a2Q3U962 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Col5a2Q3U962 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col5a2Q3U962 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col5a2Q3U962 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Col5a2Q3U962 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Col5a2Q3U962 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC24.28■■□□□ 1.48
Col5a2Q3U962 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col5a2Q3U962 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Col5a2Q3U962 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col5a2Q3U962 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Col5a2Q3U962 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
Col5a2Q3U962 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.27■■□□□ 1.48
Col5a2Q3U962 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col5a2Q3U962 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col5a2Q3U962 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Col5a2Q3U962 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Col5a2Q3U962 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC24.26■■□□□ 1.47
Col5a2Q3U962 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col5a2Q3U962 Gm20760-201ENSMUST00000179197 648 ntBASIC24.26■■□□□ 1.47
Col5a2Q3U962 Gm9988-201ENSMUST00000069786 435 ntBASIC24.26■■□□□ 1.47
Col5a2Q3U962 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col5a2Q3U962 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col5a2Q3U962 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col5a2Q3U962 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col5a2Q3U962 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col5a2Q3U962 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC24.26■■□□□ 1.47
Col5a2Q3U962 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Col5a2Q3U962 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Col5a2Q3U962 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Col5a2Q3U962 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Col5a2Q3U962 Gm27801-201ENSMUST00000184174 223 ntBASIC24.25■■□□□ 1.47
Col5a2Q3U962 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Col5a2Q3U962 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC24.25■■□□□ 1.47
Col5a2Q3U962 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col5a2Q3U962 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col5a2Q3U962 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Col5a2Q3U962 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col5a2Q3U962 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Col5a2Q3U962 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
Col5a2Q3U962 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Col5a2Q3U962 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC24.24■■□□□ 1.47
Col5a2Q3U962 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Col5a2Q3U962 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Col5a2Q3U962 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.23■■□□□ 1.47
Col5a2Q3U962 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col5a2Q3U962 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Col5a2Q3U962 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col5a2Q3U962 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Col5a2Q3U962 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Col5a2Q3U962 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.23■■□□□ 1.47
Col5a2Q3U962 Mir5133-201ENSMUST00000174955 77 ntBASIC24.23■■□□□ 1.47
Col5a2Q3U962 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Col5a2Q3U962 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col5a2Q3U962 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Col5a2Q3U962 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Col5a2Q3U962 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Col5a2Q3U962 Gm13148-201ENSMUST00000118892 745 ntBASIC24.2■■□□□ 1.47
Col5a2Q3U962 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Col5a2Q3U962 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Col5a2Q3U962 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Col5a2Q3U962 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms