Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cops9Q3U898 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cops9Q3U898 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC13.86□□□□□ -0.19
Cops9Q3U898 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cops9Q3U898 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cops9Q3U898 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cops9Q3U898 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cops9Q3U898 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.85□□□□□ -0.19
Cops9Q3U898 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cops9Q3U898 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cops9Q3U898 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.84□□□□□ -0.19
Cops9Q3U898 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Cops9Q3U898 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.84□□□□□ -0.19
Cops9Q3U898 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cops9Q3U898 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops9Q3U898 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops9Q3U898 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cops9Q3U898 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cops9Q3U898 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cops9Q3U898 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops9Q3U898 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cops9Q3U898 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops9Q3U898 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.83□□□□□ -0.2
Cops9Q3U898 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops9Q3U898 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops9Q3U898 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cops9Q3U898 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cops9Q3U898 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cops9Q3U898 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops9Q3U898 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.82□□□□□ -0.2
Cops9Q3U898 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cops9Q3U898 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops9Q3U898 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops9Q3U898 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops9Q3U898 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops9Q3U898 Golph3-202ENSMUST00000226517 2359 ntBASIC13.82□□□□□ -0.2
Cops9Q3U898 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops9Q3U898 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cops9Q3U898 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cops9Q3U898 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.81□□□□□ -0.2
Cops9Q3U898 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cops9Q3U898 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cops9Q3U898 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Gm12818-201ENSMUST00000117562 1349 ntBASIC13.81□□□□□ -0.2
Cops9Q3U898 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cops9Q3U898 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cops9Q3U898 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Cops9Q3U898 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.81□□□□□ -0.2
Cops9Q3U898 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cops9Q3U898 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cops9Q3U898 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms