Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cln6Q3U466 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Cln6Q3U466 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cln6Q3U466 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cln6Q3U466 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cln6Q3U466 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cln6Q3U466 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cln6Q3U466 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cln6Q3U466 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cln6Q3U466 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cln6Q3U466 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cln6Q3U466 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cln6Q3U466 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cln6Q3U466 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln6Q3U466 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cln6Q3U466 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cln6Q3U466 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.06■□□□□ 0.32
Cln6Q3U466 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.06■□□□□ 0.32
Cln6Q3U466 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Cln6Q3U466 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln6Q3U466 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cln6Q3U466 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Cln6Q3U466 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.05■□□□□ 0.32
Cln6Q3U466 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.05■□□□□ 0.32
Cln6Q3U466 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cln6Q3U466 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cln6Q3U466 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln6Q3U466 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln6Q3U466 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cln6Q3U466 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cln6Q3U466 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cln6Q3U466 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln6Q3U466 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln6Q3U466 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.04■□□□□ 0.32
Cln6Q3U466 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln6Q3U466 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.04■□□□□ 0.32
Cln6Q3U466 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln6Q3U466 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln6Q3U466 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.03■□□□□ 0.32
Cln6Q3U466 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln6Q3U466 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.03■□□□□ 0.32
Cln6Q3U466 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cln6Q3U466 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln6Q3U466 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln6Q3U466 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cln6Q3U466 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln6Q3U466 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln6Q3U466 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln6Q3U466 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cln6Q3U466 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cln6Q3U466 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cln6Q3U466 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cln6Q3U466 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cln6Q3U466 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln6Q3U466 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cln6Q3U466 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln6Q3U466 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cln6Q3U466 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.01■□□□□ 0.31
Cln6Q3U466 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cln6Q3U466 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.01■□□□□ 0.31
Cln6Q3U466 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln6Q3U466 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cln6Q3U466 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cln6Q3U466 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms