Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shcbp1lQ3TTP0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.24■□□□□ 0.83
Shcbp1lQ3TTP0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Shcbp1lQ3TTP0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shcbp1lQ3TTP0 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.24■□□□□ 0.83
Shcbp1lQ3TTP0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shcbp1lQ3TTP0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shcbp1lQ3TTP0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shcbp1lQ3TTP0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Shcbp1lQ3TTP0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shcbp1lQ3TTP0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shcbp1lQ3TTP0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Shcbp1lQ3TTP0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shcbp1lQ3TTP0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Shcbp1lQ3TTP0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shcbp1lQ3TTP0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shcbp1lQ3TTP0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Shcbp1lQ3TTP0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shcbp1lQ3TTP0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shcbp1lQ3TTP0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shcbp1lQ3TTP0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shcbp1lQ3TTP0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shcbp1lQ3TTP0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shcbp1lQ3TTP0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.21■□□□□ 0.83
Shcbp1lQ3TTP0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
Shcbp1lQ3TTP0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shcbp1lQ3TTP0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Shcbp1lQ3TTP0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Shcbp1lQ3TTP0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.2■□□□□ 0.82
Shcbp1lQ3TTP0 Gm8493-201ENSMUST00000196881 489 ntBASIC20.2■□□□□ 0.82
Shcbp1lQ3TTP0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.2■□□□□ 0.82
Shcbp1lQ3TTP0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shcbp1lQ3TTP0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shcbp1lQ3TTP0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shcbp1lQ3TTP0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shcbp1lQ3TTP0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Shcbp1lQ3TTP0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.18■□□□□ 0.82
Shcbp1lQ3TTP0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Shcbp1lQ3TTP0 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.18■□□□□ 0.82
Shcbp1lQ3TTP0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shcbp1lQ3TTP0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Shcbp1lQ3TTP0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Shcbp1lQ3TTP0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.18■□□□□ 0.82
Shcbp1lQ3TTP0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shcbp1lQ3TTP0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shcbp1lQ3TTP0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shcbp1lQ3TTP0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Shcbp1lQ3TTP0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shcbp1lQ3TTP0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Shcbp1lQ3TTP0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shcbp1lQ3TTP0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shcbp1lQ3TTP0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Shcbp1lQ3TTP0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Shcbp1lQ3TTP0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Shcbp1lQ3TTP0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Gm43017-201ENSMUST00000198296 752 ntBASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.14■□□□□ 0.81
Shcbp1lQ3TTP0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms