Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ThraP63058 Iqck-206ENSMUST00000208658 2891 ntBASIC20.25■□□□□ 0.83
ThraP63058 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.25■□□□□ 0.83
ThraP63058 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.25■□□□□ 0.83
ThraP63058 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ThraP63058 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ThraP63058 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ThraP63058 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ThraP63058 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ThraP63058 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ThraP63058 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ThraP63058 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ThraP63058 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ThraP63058 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ThraP63058 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ThraP63058 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ThraP63058 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ThraP63058 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ThraP63058 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ThraP63058 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ThraP63058 Gm45417-201ENSMUST00000209533 758 ntBASIC20.23■□□□□ 0.83
ThraP63058 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.23■□□□□ 0.83
ThraP63058 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ThraP63058 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ThraP63058 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ThraP63058 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ThraP63058 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ThraP63058 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ThraP63058 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ThraP63058 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
ThraP63058 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.22■□□□□ 0.83
ThraP63058 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ThraP63058 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ThraP63058 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ThraP63058 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ThraP63058 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.21■□□□□ 0.83
ThraP63058 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ThraP63058 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ThraP63058 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ThraP63058 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ThraP63058 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ThraP63058 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ThraP63058 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ThraP63058 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
ThraP63058 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ThraP63058 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ThraP63058 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ThraP63058 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.2■□□□□ 0.82
ThraP63058 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ThraP63058 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ThraP63058 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ThraP63058 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ThraP63058 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ThraP63058 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ThraP63058 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ThraP63058 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ThraP63058 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ThraP63058 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ThraP63058 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ThraP63058 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ThraP63058 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ThraP63058 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.19■□□□□ 0.82
ThraP63058 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.19■□□□□ 0.82
ThraP63058 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.18■□□□□ 0.82
ThraP63058 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ThraP63058 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Serp2-204ENSMUST00000228055 705 ntBASIC20.17■□□□□ 0.82
ThraP63058 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ThraP63058 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ThraP63058 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ThraP63058 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ThraP63058 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ThraP63058 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms