Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1P56716 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1P56716 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1P56716 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1P56716 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rp1P56716 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rp1P56716 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rp1P56716 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rp1P56716 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rp1P56716 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.83■□□□□ 0.93
Rp1P56716 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rp1P56716 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Rp1P56716 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rp1P56716 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rp1P56716 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.82■□□□□ 0.92
Rp1P56716 Gm27801-201ENSMUST00000184174 223 ntBASIC20.82■□□□□ 0.92
Rp1P56716 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rp1P56716 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rp1P56716 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rp1P56716 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rp1P56716 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.82■□□□□ 0.92
Rp1P56716 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rp1P56716 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.81■□□□□ 0.92
Rp1P56716 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rp1P56716 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rp1P56716 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rp1P56716 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rp1P56716 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rp1P56716 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.8■□□□□ 0.92
Rp1P56716 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.8■□□□□ 0.92
Rp1P56716 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rp1P56716 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.79■□□□□ 0.92
Rp1P56716 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rp1P56716 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.79■□□□□ 0.92
Rp1P56716 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1P56716 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1P56716 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1P56716 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1P56716 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1P56716 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1P56716 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rp1P56716 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.78■□□□□ 0.92
Rp1P56716 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.78■□□□□ 0.92
Rp1P56716 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.78■□□□□ 0.92
Rp1P56716 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.78■□□□□ 0.92
Rp1P56716 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1P56716 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1P56716 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1P56716 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1P56716 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1P56716 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rp1P56716 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1P56716 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rp1P56716 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1P56716 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1P56716 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1P56716 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1P56716 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1P56716 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1P56716 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rp1P56716 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rp1P56716 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.77■□□□□ 0.92
Rp1P56716 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.76■□□□□ 0.91
Rp1P56716 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Mir6236-201ENSMUST00000184437 123 ntBASIC20.76■□□□□ 0.91
Rp1P56716 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.76■□□□□ 0.91
Rp1P56716 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Rp1P56716 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.76■□□□□ 0.91
Rp1P56716 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.76■□□□□ 0.91
Rp1P56716 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rp1P56716 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Rp1P56716 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1P56716 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1P56716 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1P56716 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1P56716 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rp1P56716 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rp1P56716 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.74■□□□□ 0.91
Rp1P56716 Gm18671-201ENSMUST00000214826 683 ntBASIC20.74■□□□□ 0.91
Rp1P56716 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rp1P56716 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rp1P56716 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms