Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.96■□□□□ 0.79
Atxn1P54254 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atxn1P54254 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Atxn1P54254 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.95■□□□□ 0.78
Atxn1P54254 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atxn1P54254 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atxn1P54254 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Atxn1P54254 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.95■□□□□ 0.78
Atxn1P54254 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atxn1P54254 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atxn1P54254 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atxn1P54254 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Atxn1P54254 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Atxn1P54254 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Atxn1P54254 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Atxn1P54254 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atxn1P54254 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atxn1P54254 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atxn1P54254 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atxn1P54254 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atxn1P54254 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Atxn1P54254 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.93■□□□□ 0.78
Atxn1P54254 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.93■□□□□ 0.78
Atxn1P54254 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.93■□□□□ 0.78
Atxn1P54254 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atxn1P54254 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Atxn1P54254 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Atxn1P54254 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.93■□□□□ 0.78
Atxn1P54254 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.92■□□□□ 0.78
Atxn1P54254 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Atxn1P54254 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atxn1P54254 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atxn1P54254 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Atxn1P54254 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.92■□□□□ 0.78
Atxn1P54254 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atxn1P54254 Nespas-201ENSMUST00000143738 1083 ntBASIC19.91■□□□□ 0.78
Atxn1P54254 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.91■□□□□ 0.78
Atxn1P54254 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atxn1P54254 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atxn1P54254 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atxn1P54254 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atxn1P54254 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Atxn1P54254 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atxn1P54254 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atxn1P54254 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.9■□□□□ 0.78
Atxn1P54254 Gm42778-201ENSMUST00000199644 553 ntBASIC19.9■□□□□ 0.78
Atxn1P54254 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.9■□□□□ 0.78
Atxn1P54254 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atxn1P54254 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.9■□□□□ 0.78
Atxn1P54254 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atxn1P54254 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Atxn1P54254 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Atxn1P54254 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atxn1P54254 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atxn1P54254 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atxn1P54254 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.9■□□□□ 0.78
Atxn1P54254 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atxn1P54254 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atxn1P54254 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Atxn1P54254 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Atxn1P54254 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Atxn1P54254 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Atxn1P54254 Gm22325-201ENSMUST00000158904 308 ntBASIC19.89■□□□□ 0.77
Atxn1P54254 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atxn1P54254 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.89■□□□□ 0.77
Atxn1P54254 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atxn1P54254 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atxn1P54254 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Atxn1P54254 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atxn1P54254 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atxn1P54254 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atxn1P54254 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atxn1P54254 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atxn1P54254 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atxn1P54254 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atxn1P54254 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atxn1P54254 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.88■□□□□ 0.77
Atxn1P54254 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Atxn1P54254 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atxn1P54254 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atxn1P54254 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atxn1P54254 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Atxn1P54254 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atxn1P54254 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.87■□□□□ 0.77
Atxn1P54254 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atxn1P54254 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.87■□□□□ 0.77
Atxn1P54254 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.87■□□□□ 0.77
Atxn1P54254 Gm7143-201ENSMUST00000222811 859 ntBASIC19.87■□□□□ 0.77
Atxn1P54254 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atxn1P54254 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Atxn1P54254 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Atxn1P54254 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atxn1P54254 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.87■□□□□ 0.77
Atxn1P54254 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.87■□□□□ 0.77
Atxn1P54254 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atxn1P54254 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atxn1P54254 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Atxn1P54254 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Atxn1P54254 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atxn1P54254 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms