Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Limk1P53668 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Limk1P53668 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Limk1P53668 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Limk1P53668 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Limk1P53668 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Limk1P53668 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.71■□□□□ 0.75
Limk1P53668 Gm43530-201ENSMUST00000195920 274 ntBASIC19.71■□□□□ 0.75
Limk1P53668 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.71■□□□□ 0.75
Limk1P53668 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Limk1P53668 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Limk1P53668 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Limk1P53668 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Limk1P53668 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
Limk1P53668 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Limk1P53668 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Limk1P53668 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Limk1P53668 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Limk1P53668 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.7■□□□□ 0.74
Limk1P53668 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Limk1P53668 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Limk1P53668 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Limk1P53668 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Limk1P53668 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Limk1P53668 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk1P53668 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.69■□□□□ 0.74
Limk1P53668 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.69■□□□□ 0.74
Limk1P53668 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk1P53668 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Limk1P53668 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Limk1P53668 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk1P53668 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk1P53668 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Limk1P53668 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Limk1P53668 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.68■□□□□ 0.74
Limk1P53668 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.68■□□□□ 0.74
Limk1P53668 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk1P53668 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk1P53668 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Limk1P53668 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.68■□□□□ 0.74
Limk1P53668 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.68■□□□□ 0.74
Limk1P53668 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.68■□□□□ 0.74
Limk1P53668 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Limk1P53668 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.67■□□□□ 0.74
Limk1P53668 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.67■□□□□ 0.74
Limk1P53668 Nespas-201ENSMUST00000143738 1083 ntBASIC19.67■□□□□ 0.74
Limk1P53668 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.67■□□□□ 0.74
Limk1P53668 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Limk1P53668 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Limk1P53668 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk1P53668 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Limk1P53668 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Limk1P53668 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Limk1P53668 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.66■□□□□ 0.74
Limk1P53668 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Limk1P53668 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.66■□□□□ 0.74
Limk1P53668 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Limk1P53668 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Limk1P53668 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Limk1P53668 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Limk1P53668 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.65■□□□□ 0.74
Limk1P53668 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk1P53668 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Limk1P53668 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.65■□□□□ 0.74
Limk1P53668 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Limk1P53668 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.65■□□□□ 0.74
Limk1P53668 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk1P53668 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Limk1P53668 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk1P53668 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Limk1P53668 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.64■□□□□ 0.73
Limk1P53668 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.64■□□□□ 0.73
Limk1P53668 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Limk1P53668 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.63■□□□□ 0.73
Limk1P53668 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Limk1P53668 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Limk1P53668 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Limk1P53668 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.63■□□□□ 0.73
Limk1P53668 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Limk1P53668 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Limk1P53668 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Limk1P53668 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Limk1P53668 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Limk1P53668 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Limk1P53668 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Limk1P53668 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk1P53668 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk1P53668 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Limk1P53668 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.62■□□□□ 0.73
Limk1P53668 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk1P53668 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Limk1P53668 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms