Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rfx2P48379 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx2P48379 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.03■□□□□ 0.96
Rfx2P48379 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Rfx2P48379 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.03■□□□□ 0.96
Rfx2P48379 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx2P48379 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx2P48379 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rfx2P48379 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.03■□□□□ 0.96
Rfx2P48379 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx2P48379 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx2P48379 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Rfx2P48379 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rfx2P48379 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.02■□□□□ 0.96
Rfx2P48379 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.02■□□□□ 0.96
Rfx2P48379 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rfx2P48379 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rfx2P48379 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx2P48379 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Rfx2P48379 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx2P48379 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rfx2P48379 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rfx2P48379 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx2P48379 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Rfx2P48379 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx2P48379 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21■□□□□ 0.95
Rfx2P48379 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21■□□□□ 0.95
Rfx2P48379 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rfx2P48379 Mir7075-201ENSMUST00000184187 82 ntBASIC21■□□□□ 0.95
Rfx2P48379 Gm5576-201ENSMUST00000075809 1236 ntBASIC21■□□□□ 0.95
Rfx2P48379 Gm6139-201ENSMUST00000079261 882 ntBASIC21■□□□□ 0.95
Rfx2P48379 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rfx2P48379 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx2P48379 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfx2P48379 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rfx2P48379 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx2P48379 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Rfx2P48379 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.99■□□□□ 0.95
Rfx2P48379 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx2P48379 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx2P48379 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Rfx2P48379 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx2P48379 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx2P48379 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.98■□□□□ 0.95
Rfx2P48379 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Rfx2P48379 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx2P48379 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.98■□□□□ 0.95
Rfx2P48379 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx2P48379 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx2P48379 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.98■□□□□ 0.95
Rfx2P48379 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx2P48379 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx2P48379 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx2P48379 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx2P48379 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx2P48379 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx2P48379 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.97■□□□□ 0.95
Rfx2P48379 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx2P48379 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Rfx2P48379 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx2P48379 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx2P48379 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx2P48379 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Rfx2P48379 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx2P48379 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx2P48379 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx2P48379 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx2P48379 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx2P48379 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rfx2P48379 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx2P48379 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx2P48379 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx2P48379 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx2P48379 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx2P48379 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx2P48379 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx2P48379 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx2P48379 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx2P48379 Gm43530-201ENSMUST00000195920 274 ntBASIC20.94■□□□□ 0.94
Rfx2P48379 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rfx2P48379 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx2P48379 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx2P48379 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx2P48379 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Rfx2P48379 Iqck-206ENSMUST00000208658 2891 ntBASIC20.93■□□□□ 0.94
Rfx2P48379 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rfx2P48379 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rfx2P48379 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx2P48379 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
Rfx2P48379 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx2P48379 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms