Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Xcl1P47993 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Xcl1P47993 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Xcl1P47993 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Xcl1P47993 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Xcl1P47993 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Xcl1P47993 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xcl1P47993 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Xcl1P47993 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xcl1P47993 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Xcl1P47993 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Xcl1P47993 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Xcl1P47993 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Xcl1P47993 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Xcl1P47993 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Xcl1P47993 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.17□□□□□ -0.3
Xcl1P47993 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Xcl1P47993 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC13.17□□□□□ -0.3
Xcl1P47993 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Xcl1P47993 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Xcl1P47993 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Xcl1P47993 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Xcl1P47993 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC13.16□□□□□ -0.3
Xcl1P47993 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC13.16□□□□□ -0.3
Xcl1P47993 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Xcl1P47993 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Xcl1P47993 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Xcl1P47993 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Xcl1P47993 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC13.15□□□□□ -0.3
Xcl1P47993 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xcl1P47993 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xcl1P47993 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xcl1P47993 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xcl1P47993 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xcl1P47993 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Xcl1P47993 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Xcl1P47993 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Xcl1P47993 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xcl1P47993 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Xcl1P47993 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC13.15□□□□□ -0.3
Xcl1P47993 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Xcl1P47993 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Xcl1P47993 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Xcl1P47993 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Xcl1P47993 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.14□□□□□ -0.31
Xcl1P47993 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.14□□□□□ -0.31
Xcl1P47993 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Xcl1P47993 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Xcl1P47993 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.13□□□□□ -0.31
Xcl1P47993 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Xcl1P47993 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms