Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Gm27011-201ENSMUST00000182352 972 ntBASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.41■□□□□ 0.86
Tnfrsf4P47741 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf4P47741 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.41■□□□□ 0.86
Tnfrsf4P47741 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf4P47741 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf4P47741 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf4P47741 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf4P47741 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf4P47741 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Gm12933-201ENSMUST00000120203 872 ntBASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf4P47741 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Tnfrsf4P47741 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfrsf4P47741 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf4P47741 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf4P47741 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf4P47741 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Tnfrsf4P47741 Gm13234-201ENSMUST00000120010 747 ntBASIC20.36■□□□□ 0.85
Tnfrsf4P47741 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf4P47741 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf4P47741 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf4P47741 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tnfrsf4P47741 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf4P47741 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.35■□□□□ 0.85
Tnfrsf4P47741 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf4P47741 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tnfrsf4P47741 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.35■□□□□ 0.85
Tnfrsf4P47741 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Tnfrsf4P47741 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.34■□□□□ 0.85
Tnfrsf4P47741 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Tnfrsf4P47741 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf4P47741 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf4P47741 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf4P47741 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf4P47741 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.33■□□□□ 0.85
Tnfrsf4P47741 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tnfrsf4P47741 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.33■□□□□ 0.85
Tnfrsf4P47741 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Tnfrsf4P47741 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Tnfrsf4P47741 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf4P47741 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tnfrsf4P47741 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf4P47741 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf4P47741 Gm27801-201ENSMUST00000184174 223 ntBASIC20.32■□□□□ 0.84
Tnfrsf4P47741 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Tnfrsf4P47741 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms