Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.64■□□□□ 0.57
Foxa1P35582 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa1P35582 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa1P35582 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa1P35582 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.63■□□□□ 0.57
Foxa1P35582 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa1P35582 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa1P35582 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa1P35582 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa1P35582 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa1P35582 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.63■□□□□ 0.57
Foxa1P35582 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Foxa1P35582 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.63■□□□□ 0.57
Foxa1P35582 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Foxa1P35582 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa1P35582 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa1P35582 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa1P35582 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa1P35582 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa1P35582 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Foxa1P35582 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Foxa1P35582 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Foxa1P35582 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.61■□□□□ 0.57
Foxa1P35582 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.61■□□□□ 0.57
Foxa1P35582 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Foxa1P35582 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Foxa1P35582 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Foxa1P35582 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa1P35582 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Foxa1P35582 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa1P35582 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.59■□□□□ 0.57
Foxa1P35582 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa1P35582 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa1P35582 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa1P35582 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa1P35582 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Foxa1P35582 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Foxa1P35582 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Foxa1P35582 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Foxa1P35582 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Foxa1P35582 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa1P35582 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.58■□□□□ 0.56
Foxa1P35582 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa1P35582 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa1P35582 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa1P35582 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa1P35582 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.58■□□□□ 0.56
Foxa1P35582 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa1P35582 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa1P35582 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Foxa1P35582 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Foxa1P35582 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Foxa1P35582 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.57■□□□□ 0.56
Foxa1P35582 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.57■□□□□ 0.56
Foxa1P35582 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.57■□□□□ 0.56
Foxa1P35582 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Foxa1P35582 Gm13241-201ENSMUST00000094493 780 ntBASIC18.57■□□□□ 0.56
Foxa1P35582 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Foxa1P35582 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Foxa1P35582 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Foxa1P35582 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.57■□□□□ 0.56
Foxa1P35582 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxa1P35582 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Foxa1P35582 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Foxa1P35582 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxa1P35582 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.56■□□□□ 0.56
Foxa1P35582 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.56■□□□□ 0.56
Foxa1P35582 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxa1P35582 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxa1P35582 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxa1P35582 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Foxa1P35582 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa1P35582 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.55■□□□□ 0.56
Foxa1P35582 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa1P35582 Gm21956-201ENSMUST00000179946 522 ntBASIC18.55■□□□□ 0.56
Foxa1P35582 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.55■□□□□ 0.56
Foxa1P35582 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.55■□□□□ 0.56
Foxa1P35582 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa1P35582 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.55■□□□□ 0.56
Foxa1P35582 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.55■□□□□ 0.56
Foxa1P35582 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa1P35582 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Foxa1P35582 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.54■□□□□ 0.56
Foxa1P35582 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Foxa1P35582 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Foxa1P35582 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Foxa1P35582 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.54■□□□□ 0.56
Foxa1P35582 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms