Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RxrbP28704 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RxrbP28704 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RxrbP28704 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RxrbP28704 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RxrbP28704 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RxrbP28704 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RxrbP28704 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RxrbP28704 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RxrbP28704 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RxrbP28704 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.23■□□□□ 0.83
RxrbP28704 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RxrbP28704 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RxrbP28704 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RxrbP28704 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RxrbP28704 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RxrbP28704 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RxrbP28704 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RxrbP28704 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RxrbP28704 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.21■□□□□ 0.83
RxrbP28704 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RxrbP28704 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RxrbP28704 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RxrbP28704 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RxrbP28704 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RxrbP28704 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RxrbP28704 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RxrbP28704 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.2■□□□□ 0.82
RxrbP28704 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RxrbP28704 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RxrbP28704 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RxrbP28704 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.2■□□□□ 0.82
RxrbP28704 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RxrbP28704 Golph3-205ENSMUST00000228671 2842 ntBASIC20.2■□□□□ 0.82
RxrbP28704 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RxrbP28704 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RxrbP28704 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RxrbP28704 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RxrbP28704 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RxrbP28704 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.19■□□□□ 0.82
RxrbP28704 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RxrbP28704 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RxrbP28704 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RxrbP28704 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RxrbP28704 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RxrbP28704 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RxrbP28704 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
RxrbP28704 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
RxrbP28704 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RxrbP28704 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.18■□□□□ 0.82
RxrbP28704 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RxrbP28704 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RxrbP28704 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RxrbP28704 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RxrbP28704 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.17■□□□□ 0.82
RxrbP28704 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.17■□□□□ 0.82
RxrbP28704 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RxrbP28704 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RxrbP28704 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RxrbP28704 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RxrbP28704 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RxrbP28704 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RxrbP28704 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RxrbP28704 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RxrbP28704 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RxrbP28704 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RxrbP28704 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
RxrbP28704 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RxrbP28704 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RxrbP28704 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms