Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col8a2P25318 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col8a2P25318 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col8a2P25318 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col8a2P25318 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col8a2P25318 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col8a2P25318 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Col8a2P25318 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col8a2P25318 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col8a2P25318 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col8a2P25318 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col8a2P25318 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col8a2P25318 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.84■□□□□ 0.29
Col8a2P25318 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.84■□□□□ 0.29
Col8a2P25318 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col8a2P25318 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.83■□□□□ 0.28
Col8a2P25318 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.83■□□□□ 0.28
Col8a2P25318 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col8a2P25318 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.83■□□□□ 0.28
Col8a2P25318 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col8a2P25318 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Col8a2P25318 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col8a2P25318 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col8a2P25318 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col8a2P25318 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.82■□□□□ 0.28
Col8a2P25318 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Col8a2P25318 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.82■□□□□ 0.28
Col8a2P25318 Gm43017-201ENSMUST00000198296 752 ntBASIC16.82■□□□□ 0.28
Col8a2P25318 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col8a2P25318 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col8a2P25318 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col8a2P25318 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col8a2P25318 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col8a2P25318 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col8a2P25318 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col8a2P25318 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col8a2P25318 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Col8a2P25318 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col8a2P25318 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col8a2P25318 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col8a2P25318 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col8a2P25318 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Col8a2P25318 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Col8a2P25318 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Col8a2P25318 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Col8a2P25318 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.8■□□□□ 0.28
Col8a2P25318 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Col8a2P25318 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.8■□□□□ 0.28
Col8a2P25318 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col8a2P25318 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col8a2P25318 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col8a2P25318 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col8a2P25318 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col8a2P25318 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col8a2P25318 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.79■□□□□ 0.28
Col8a2P25318 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.79■□□□□ 0.28
Col8a2P25318 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col8a2P25318 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col8a2P25318 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col8a2P25318 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col8a2P25318 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col8a2P25318 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col8a2P25318 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col8a2P25318 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col8a2P25318 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.78■□□□□ 0.28
Col8a2P25318 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col8a2P25318 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col8a2P25318 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col8a2P25318 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col8a2P25318 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Col8a2P25318 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col8a2P25318 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col8a2P25318 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Col8a2P25318 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col8a2P25318 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col8a2P25318 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.77■□□□□ 0.28
Col8a2P25318 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms