Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.77■□□□□ 0.43
P20040 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
P20040 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
P20040 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
P20040 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P20040 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P20040 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.76■□□□□ 0.43
P20040 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P20040 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
P20040 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
P20040 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P20040 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
P20040 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P20040 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P20040 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
P20040 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P20040 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P20040 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.75■□□□□ 0.43
P20040 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.75■□□□□ 0.43
P20040 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
P20040 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P20040 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
P20040 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P20040 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.75■□□□□ 0.43
P20040 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
P20040 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P20040 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.74■□□□□ 0.43
P20040 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P20040 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.74■□□□□ 0.43
P20040 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
P20040 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P20040 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P20040 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P20040 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P20040 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P20040 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P20040 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P20040 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P20040 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
P20040 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
P20040 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P20040 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P20040 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.73■□□□□ 0.43
P20040 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P20040 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P20040 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.72■□□□□ 0.43
P20040 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.72■□□□□ 0.43
P20040 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.72■□□□□ 0.43
P20040 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.72■□□□□ 0.43
P20040 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P20040 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P20040 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
P20040 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
P20040 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
P20040 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P20040 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
P20040 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
P20040 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.71■□□□□ 0.43
P20040 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
P20040 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
P20040 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.7■□□□□ 0.42
P20040 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P20040 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P20040 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P20040 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
P20040 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P20040 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P20040 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
P20040 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
P20040 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
P20040 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.69■□□□□ 0.42
P20040 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.69■□□□□ 0.42
P20040 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.69■□□□□ 0.42
P20040 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
P20040 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P20040 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P20040 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
P20040 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P20040 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
P20040 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P20040 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.68■□□□□ 0.42
P20040 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P20040 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P20040 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms