Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Irf1P15314 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf1P15314 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf1P15314 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf1P15314 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.4■□□□□ 0.54
Irf1P15314 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.4■□□□□ 0.54
Irf1P15314 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf1P15314 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Irf1P15314 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf1P15314 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Irf1P15314 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf1P15314 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf1P15314 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Irf1P15314 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.39■□□□□ 0.53
Irf1P15314 Gm7143-201ENSMUST00000222811 859 ntBASIC18.39■□□□□ 0.53
Irf1P15314 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Irf1P15314 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf1P15314 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Irf1P15314 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf1P15314 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.39■□□□□ 0.53
Irf1P15314 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Irf1P15314 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf1P15314 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Irf1P15314 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf1P15314 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Irf1P15314 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
Irf1P15314 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Irf1P15314 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Irf1P15314 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Irf1P15314 Gm27454-201ENSMUST00000185090 204 ntBASIC18.38■□□□□ 0.53
Irf1P15314 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Irf1P15314 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf1P15314 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf1P15314 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf1P15314 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf1P15314 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf1P15314 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Irf1P15314 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Irf1P15314 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Irf1P15314 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Irf1P15314 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf1P15314 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.37■□□□□ 0.53
Irf1P15314 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf1P15314 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.37■□□□□ 0.53
Irf1P15314 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf1P15314 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.37■□□□□ 0.53
Irf1P15314 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Irf1P15314 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Gm45417-201ENSMUST00000209533 758 ntBASIC18.36■□□□□ 0.53
Irf1P15314 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Irf1P15314 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf1P15314 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.35■□□□□ 0.53
Irf1P15314 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Irf1P15314 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf1P15314 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf1P15314 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Irf1P15314 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf1P15314 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf1P15314 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf1P15314 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf1P15314 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.34■□□□□ 0.53
Irf1P15314 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf1P15314 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf1P15314 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf1P15314 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf1P15314 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
Irf1P15314 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf1P15314 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf1P15314 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Irf1P15314 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf1P15314 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms