Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PtcraP0C6B2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PtcraP0C6B2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PtcraP0C6B2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.47■□□□□ 0.39
PtcraP0C6B2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PtcraP0C6B2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PtcraP0C6B2 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.45■□□□□ 0.38
PtcraP0C6B2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.45■□□□□ 0.38
PtcraP0C6B2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PtcraP0C6B2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PtcraP0C6B2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PtcraP0C6B2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PtcraP0C6B2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PtcraP0C6B2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PtcraP0C6B2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PtcraP0C6B2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.45■□□□□ 0.38
PtcraP0C6B2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.44■□□□□ 0.38
PtcraP0C6B2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PtcraP0C6B2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PtcraP0C6B2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PtcraP0C6B2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PtcraP0C6B2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PtcraP0C6B2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PtcraP0C6B2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PtcraP0C6B2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PtcraP0C6B2 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.43■□□□□ 0.38
PtcraP0C6B2 Gm9847-201ENSMUST00000052528 599 ntBASIC17.43■□□□□ 0.38
PtcraP0C6B2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PtcraP0C6B2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PtcraP0C6B2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PtcraP0C6B2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PtcraP0C6B2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PtcraP0C6B2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PtcraP0C6B2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PtcraP0C6B2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PtcraP0C6B2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.4■□□□□ 0.38
PtcraP0C6B2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PtcraP0C6B2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PtcraP0C6B2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.4■□□□□ 0.38
PtcraP0C6B2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms