Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc1P07903 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ercc1P07903 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.8■□□□□ 0.28
Ercc1P07903 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Ercc1P07903 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ercc1P07903 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ercc1P07903 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc1P07903 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ercc1P07903 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.78■□□□□ 0.28
Ercc1P07903 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ercc1P07903 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc1P07903 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ercc1P07903 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc1P07903 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc1P07903 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc1P07903 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc1P07903 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc1P07903 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ercc1P07903 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc1P07903 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.77■□□□□ 0.27
Ercc1P07903 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc1P07903 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.77■□□□□ 0.27
Ercc1P07903 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ercc1P07903 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ercc1P07903 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc1P07903 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ercc1P07903 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc1P07903 Gm27502-201ENSMUST00000183495 199 ntBASIC16.76■□□□□ 0.27
Ercc1P07903 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.76■□□□□ 0.27
Ercc1P07903 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc1P07903 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc1P07903 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ercc1P07903 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc1P07903 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ercc1P07903 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc1P07903 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.75■□□□□ 0.27
Ercc1P07903 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.75■□□□□ 0.27
Ercc1P07903 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc1P07903 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc1P07903 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.75■□□□□ 0.27
Ercc1P07903 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.75■□□□□ 0.27
Ercc1P07903 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc1P07903 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.75■□□□□ 0.27
Ercc1P07903 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ercc1P07903 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ercc1P07903 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc1P07903 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc1P07903 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ercc1P07903 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Ercc1P07903 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ercc1P07903 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.74■□□□□ 0.27
Ercc1P07903 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.74■□□□□ 0.27
Ercc1P07903 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.74■□□□□ 0.27
Ercc1P07903 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ercc1P07903 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Ercc1P07903 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc1P07903 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc1P07903 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.73■□□□□ 0.27
Ercc1P07903 Gm12366-201ENSMUST00000121722 873 ntBASIC16.73■□□□□ 0.27
Ercc1P07903 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.73■□□□□ 0.27
Ercc1P07903 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc1P07903 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.73■□□□□ 0.27
Ercc1P07903 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc1P07903 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.73■□□□□ 0.27
Ercc1P07903 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc1P07903 Gm5786-201ENSMUST00000085368 882 ntBASIC16.73■□□□□ 0.27
Ercc1P07903 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc1P07903 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.73■□□□□ 0.27
Ercc1P07903 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ercc1P07903 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ercc1P07903 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms