Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04945 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
P04945 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04945 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
P04945 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04945 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
P04945 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
P04945 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
P04945 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04945 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
P04945 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04945 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04945 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04945 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
P04945 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04945 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04945 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
P04945 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.29■□□□□ 0.36
P04945 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.29■□□□□ 0.36
P04945 Gm22238-201ENSMUST00000175222 88 ntBASIC17.29■□□□□ 0.36
P04945 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.29■□□□□ 0.36
P04945 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.29■□□□□ 0.36
P04945 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04945 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
P04945 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P04945 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04945 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
P04945 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04945 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04945 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04945 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
P04945 Gm45102-201ENSMUST00000207427 857 ntBASIC17.28■□□□□ 0.36
P04945 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.28■□□□□ 0.36
P04945 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04945 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04945 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04945 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
P04945 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.27■□□□□ 0.36
P04945 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04945 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
P04945 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04945 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.26■□□□□ 0.35
P04945 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P04945 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.26■□□□□ 0.35
P04945 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
P04945 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.26■□□□□ 0.35
P04945 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04945 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04945 Mir6236-201ENSMUST00000184437 123 ntBASIC17.25■□□□□ 0.35
P04945 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.25■□□□□ 0.35
P04945 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04945 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04945 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04945 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04945 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04945 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04945 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04945 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04945 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04945 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04945 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04945 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04945 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
P04945 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04945 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P04945 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04945 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.23■□□□□ 0.35
P04945 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04945 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.23■□□□□ 0.35
P04945 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P04945 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
P04945 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P04945 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms