Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
P04224 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04224 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P04224 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04224 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P04224 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P04224 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04224 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P04224 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04224 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04224 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04224 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
P04224 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04224 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
P04224 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
P04224 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
P04224 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
P04224 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P04224 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
P04224 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
P04224 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
P04224 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P04224 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
P04224 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
P04224 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
P04224 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
P04224 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.5■□□□□ 0.39
P04224 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
P04224 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04224 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04224 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04224 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04224 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04224 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P04224 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.48■□□□□ 0.39
P04224 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
P04224 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
P04224 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.48■□□□□ 0.39
P04224 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04224 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.48■□□□□ 0.39
P04224 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
P04224 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
P04224 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04224 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P04224 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04224 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
P04224 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P04224 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04224 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04224 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04224 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04224 Gm27502-201ENSMUST00000183495 199 ntBASIC17.47■□□□□ 0.39
P04224 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.47■□□□□ 0.39
P04224 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P04224 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.46■□□□□ 0.39
P04224 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
P04224 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P04224 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
P04224 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
P04224 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
P04224 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
P04224 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04224 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04224 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
P04224 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04224 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.45■□□□□ 0.38
P04224 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
P04224 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04224 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC17.45■□□□□ 0.38
P04224 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.45■□□□□ 0.38
P04224 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04224 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04224 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04224 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04224 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms