Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt1P04104 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt1P04104 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt1P04104 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Krt1P04104 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt1P04104 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt1P04104 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.02■□□□□ 0.64
Krt1P04104 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Krt1P04104 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Krt1P04104 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt1P04104 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt1P04104 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt1P04104 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Krt1P04104 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Krt1P04104 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Krt1P04104 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Krt1P04104 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt1P04104 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt1P04104 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Krt1P04104 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Krt1P04104 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Krt1P04104 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Krt1P04104 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.01■□□□□ 0.63
Krt1P04104 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.01■□□□□ 0.63
Krt1P04104 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.01■□□□□ 0.63
Krt1P04104 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt1P04104 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt1P04104 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt1P04104 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
Krt1P04104 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Krt1P04104 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt1P04104 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Krt1P04104 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Krt1P04104 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Krt1P04104 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt1P04104 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt1P04104 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt1P04104 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt1P04104 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Krt1P04104 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.98■□□□□ 0.63
Krt1P04104 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.98■□□□□ 0.63
Krt1P04104 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.98■□□□□ 0.63
Krt1P04104 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt1P04104 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt1P04104 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Krt1P04104 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.98■□□□□ 0.63
Krt1P04104 Gm8503-201ENSMUST00000118131 455 ntBASIC18.97■□□□□ 0.63
Krt1P04104 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt1P04104 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Krt1P04104 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt1P04104 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt1P04104 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt1P04104 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Krt1P04104 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.97■□□□□ 0.63
Krt1P04104 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Krt1P04104 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt1P04104 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt1P04104 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Krt1P04104 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Krt1P04104 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt1P04104 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.96■□□□□ 0.63
Krt1P04104 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt1P04104 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt1P04104 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt1P04104 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt1P04104 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Krt1P04104 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Krt1P04104 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Krt1P04104 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt1P04104 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt1P04104 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt1P04104 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt1P04104 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.95■□□□□ 0.62
Krt1P04104 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt1P04104 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Krt1P04104 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Krt1P04104 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.95■□□□□ 0.62
Krt1P04104 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Krt1P04104 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Krt1P04104 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Krt1P04104 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms