Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Hbb-b1P02088 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hbb-b1P02088 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Hbb-b1P02088 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.21□□□□□ -0.13
Hbb-b1P02088 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Hbb-b1P02088 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hbb-b1P02088 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Hbb-b1P02088 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Hbb-b1P02088 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.2□□□□□ -0.14
Hbb-b1P02088 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Hbb-b1P02088 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.2□□□□□ -0.14
Hbb-b1P02088 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.2□□□□□ -0.14
Hbb-b1P02088 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Hbb-b1P02088 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hbb-b1P02088 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.18□□□□□ -0.14
Hbb-b1P02088 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hbb-b1P02088 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hbb-b1P02088 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms