Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CopeO89079 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopeO89079 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CopeO89079 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CopeO89079 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopeO89079 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CopeO89079 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopeO89079 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CopeO89079 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CopeO89079 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.73■□□□□ 0.91
CopeO89079 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CopeO89079 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.73■□□□□ 0.91
CopeO89079 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.72■□□□□ 0.91
CopeO89079 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.72■□□□□ 0.91
CopeO89079 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CopeO89079 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
CopeO89079 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.71■□□□□ 0.91
CopeO89079 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CopeO89079 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.71■□□□□ 0.91
CopeO89079 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopeO89079 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopeO89079 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CopeO89079 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.71■□□□□ 0.91
CopeO89079 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopeO89079 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopeO89079 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CopeO89079 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CopeO89079 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CopeO89079 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CopeO89079 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CopeO89079 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CopeO89079 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CopeO89079 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.7■□□□□ 0.9
CopeO89079 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.7■□□□□ 0.9
CopeO89079 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CopeO89079 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.7■□□□□ 0.9
CopeO89079 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CopeO89079 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CopeO89079 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CopeO89079 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopeO89079 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopeO89079 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopeO89079 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopeO89079 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CopeO89079 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CopeO89079 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CopeO89079 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopeO89079 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopeO89079 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CopeO89079 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CopeO89079 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CopeO89079 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopeO89079 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CopeO89079 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CopeO89079 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CopeO89079 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.67■□□□□ 0.9
CopeO89079 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CopeO89079 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CopeO89079 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CopeO89079 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CopeO89079 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CopeO89079 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
CopeO89079 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopeO89079 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CopeO89079 Gm45444-201ENSMUST00000211394 898 ntBASIC20.66■□□□□ 0.9
CopeO89079 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CopeO89079 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopeO89079 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CopeO89079 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.65■□□□□ 0.9
CopeO89079 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CopeO89079 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.65■□□□□ 0.9
CopeO89079 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CopeO89079 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CopeO89079 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CopeO89079 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CopeO89079 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.64■□□□□ 0.9
CopeO89079 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CopeO89079 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CopeO89079 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CopeO89079 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms