Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Gm9988-201ENSMUST00000069786 435 ntBASIC21.96■■□□□ 1.11
DcxO88809 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.96■■□□□ 1.11
DcxO88809 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
DcxO88809 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
DcxO88809 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
DcxO88809 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
DcxO88809 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
DcxO88809 Gm7977-201ENSMUST00000193787 748 ntBASIC21.95■■□□□ 1.1
DcxO88809 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
DcxO88809 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
DcxO88809 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
DcxO88809 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
DcxO88809 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.94■■□□□ 1.1
DcxO88809 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.94■■□□□ 1.1
DcxO88809 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.94■■□□□ 1.1
DcxO88809 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
DcxO88809 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
DcxO88809 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DcxO88809 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
DcxO88809 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
DcxO88809 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DcxO88809 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.93■■□□□ 1.1
DcxO88809 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DcxO88809 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DcxO88809 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DcxO88809 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.93■■□□□ 1.1
DcxO88809 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DcxO88809 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DcxO88809 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DcxO88809 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DcxO88809 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
DcxO88809 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DcxO88809 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DcxO88809 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DcxO88809 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DcxO88809 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DcxO88809 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
DcxO88809 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
DcxO88809 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DcxO88809 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DcxO88809 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DcxO88809 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DcxO88809 Gm4968-201ENSMUST00000071458 858 ntBASIC21.91■■□□□ 1.1
DcxO88809 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.91■■□□□ 1.1
DcxO88809 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DcxO88809 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DcxO88809 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DcxO88809 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DcxO88809 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DcxO88809 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DcxO88809 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
DcxO88809 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.9■■□□□ 1.1
DcxO88809 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.9■■□□□ 1.1
DcxO88809 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DcxO88809 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.89■■□□□ 1.09
DcxO88809 Mir5133-201ENSMUST00000174955 77 ntBASIC21.89■■□□□ 1.09
DcxO88809 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.89■■□□□ 1.09
DcxO88809 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DcxO88809 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.89■■□□□ 1.09
DcxO88809 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.89■■□□□ 1.09
DcxO88809 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
DcxO88809 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.88■■□□□ 1.09
DcxO88809 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Gm27801-201ENSMUST00000184174 223 ntBASIC21.88■■□□□ 1.09
DcxO88809 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
DcxO88809 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
DcxO88809 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DcxO88809 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DcxO88809 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
DcxO88809 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.87■■□□□ 1.09
DcxO88809 Gm13234-201ENSMUST00000120010 747 ntBASIC21.87■■□□□ 1.09
DcxO88809 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
DcxO88809 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DcxO88809 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DcxO88809 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
DcxO88809 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
DcxO88809 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
DcxO88809 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DcxO88809 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
DcxO88809 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
DcxO88809 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.86■■□□□ 1.09
DcxO88809 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DcxO88809 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.85■■□□□ 1.09
DcxO88809 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
DcxO88809 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DcxO88809 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
DcxO88809 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DcxO88809 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
DcxO88809 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
DcxO88809 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.84■■□□□ 1.09
DcxO88809 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms