Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ClppO88696 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClppO88696 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ClppO88696 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClppO88696 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClppO88696 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClppO88696 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ClppO88696 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ClppO88696 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClppO88696 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
ClppO88696 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClppO88696 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.5■□□□□ 0.71
ClppO88696 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ClppO88696 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
ClppO88696 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ClppO88696 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ClppO88696 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ClppO88696 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ClppO88696 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ClppO88696 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ClppO88696 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ClppO88696 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ClppO88696 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ClppO88696 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
ClppO88696 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ClppO88696 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ClppO88696 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ClppO88696 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ClppO88696 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ClppO88696 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
ClppO88696 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ClppO88696 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.47■□□□□ 0.71
ClppO88696 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.47■□□□□ 0.71
ClppO88696 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.47■□□□□ 0.71
ClppO88696 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ClppO88696 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.47■□□□□ 0.71
ClppO88696 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClppO88696 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClppO88696 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ClppO88696 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClppO88696 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClppO88696 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
ClppO88696 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.46■□□□□ 0.71
ClppO88696 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClppO88696 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClppO88696 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.46■□□□□ 0.71
ClppO88696 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClppO88696 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
ClppO88696 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ClppO88696 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.45■□□□□ 0.7
ClppO88696 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClppO88696 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ClppO88696 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ClppO88696 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ClppO88696 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ClppO88696 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClppO88696 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClppO88696 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.44■□□□□ 0.7
ClppO88696 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.44■□□□□ 0.7
ClppO88696 Gm6139-201ENSMUST00000079261 882 ntBASIC19.44■□□□□ 0.7
ClppO88696 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClppO88696 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.43■□□□□ 0.7
ClppO88696 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.43■□□□□ 0.7
ClppO88696 Gm43137-201ENSMUST00000198052 594 ntBASIC19.43■□□□□ 0.7
ClppO88696 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ClppO88696 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
ClppO88696 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ClppO88696 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ClppO88696 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.42■□□□□ 0.7
ClppO88696 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClppO88696 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClppO88696 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClppO88696 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.42■□□□□ 0.7
ClppO88696 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ClppO88696 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.42■□□□□ 0.7
ClppO88696 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClppO88696 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClppO88696 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClppO88696 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClppO88696 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClppO88696 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ClppO88696 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClppO88696 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClppO88696 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ClppO88696 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.41■□□□□ 0.7
ClppO88696 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.41■□□□□ 0.7
ClppO88696 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.41■□□□□ 0.7
ClppO88696 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClppO88696 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClppO88696 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
ClppO88696 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.41■□□□□ 0.7
ClppO88696 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ClppO88696 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.4■□□□□ 0.7
ClppO88696 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.4■□□□□ 0.7
ClppO88696 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClppO88696 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClppO88696 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClppO88696 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
ClppO88696 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.4■□□□□ 0.7
ClppO88696 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms