Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.25■□□□□ 0.67
Tgfbr3O88393 Gm11421-201ENSMUST00000122124 294 ntBASIC19.25■□□□□ 0.67
Tgfbr3O88393 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tgfbr3O88393 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Tgfbr3O88393 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tgfbr3O88393 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tgfbr3O88393 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfbr3O88393 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfbr3O88393 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfbr3O88393 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tgfbr3O88393 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tgfbr3O88393 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.24■□□□□ 0.67
Tgfbr3O88393 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tgfbr3O88393 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tgfbr3O88393 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Tgfbr3O88393 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tgfbr3O88393 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.22■□□□□ 0.67
Tgfbr3O88393 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfbr3O88393 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfbr3O88393 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfbr3O88393 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfbr3O88393 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.22■□□□□ 0.67
Tgfbr3O88393 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfbr3O88393 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tgfbr3O88393 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Gm42778-201ENSMUST00000199644 553 ntBASIC19.21■□□□□ 0.67
Tgfbr3O88393 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Tgfbr3O88393 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.2■□□□□ 0.66
Tgfbr3O88393 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Tgfbr3O88393 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfbr3O88393 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfbr3O88393 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfbr3O88393 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Tgfbr3O88393 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.19■□□□□ 0.66
Tgfbr3O88393 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.19■□□□□ 0.66
Tgfbr3O88393 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Tgfbr3O88393 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.19■□□□□ 0.66
Tgfbr3O88393 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Tgfbr3O88393 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfbr3O88393 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfbr3O88393 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfbr3O88393 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfbr3O88393 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfbr3O88393 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.18■□□□□ 0.66
Tgfbr3O88393 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfbr3O88393 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.18■□□□□ 0.66
Tgfbr3O88393 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Tgfbr3O88393 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tgfbr3O88393 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr3O88393 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr3O88393 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.16■□□□□ 0.66
Tgfbr3O88393 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr3O88393 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr3O88393 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr3O88393 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.16■□□□□ 0.66
Tgfbr3O88393 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.16■□□□□ 0.66
Tgfbr3O88393 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tgfbr3O88393 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.16■□□□□ 0.66
Tgfbr3O88393 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tgfbr3O88393 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms