Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pdlim3O70209 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pdlim3O70209 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim3O70209 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pdlim3O70209 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim3O70209 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim3O70209 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim3O70209 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Pdlim3O70209 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pdlim3O70209 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim3O70209 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim3O70209 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Pdlim3O70209 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pdlim3O70209 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim3O70209 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim3O70209 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim3O70209 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pdlim3O70209 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim3O70209 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim3O70209 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim3O70209 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim3O70209 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pdlim3O70209 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Pdlim3O70209 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Pdlim3O70209 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim3O70209 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Pdlim3O70209 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim3O70209 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim3O70209 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.21■□□□□ 0.51
Pdlim3O70209 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim3O70209 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.21■□□□□ 0.51
Pdlim3O70209 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim3O70209 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim3O70209 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim3O70209 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pdlim3O70209 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim3O70209 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pdlim3O70209 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.2■□□□□ 0.5
Pdlim3O70209 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim3O70209 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pdlim3O70209 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim3O70209 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pdlim3O70209 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.2■□□□□ 0.5
Pdlim3O70209 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim3O70209 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.19■□□□□ 0.5
Pdlim3O70209 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.19■□□□□ 0.5
Pdlim3O70209 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim3O70209 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.19■□□□□ 0.5
Pdlim3O70209 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim3O70209 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim3O70209 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pdlim3O70209 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim3O70209 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pdlim3O70209 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim3O70209 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pdlim3O70209 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim3O70209 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.18■□□□□ 0.5
Pdlim3O70209 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pdlim3O70209 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pdlim3O70209 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pdlim3O70209 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim3O70209 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim3O70209 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim3O70209 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim3O70209 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.17■□□□□ 0.5
Pdlim3O70209 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim3O70209 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pdlim3O70209 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim3O70209 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim3O70209 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim3O70209 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim3O70209 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim3O70209 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.16■□□□□ 0.5
Pdlim3O70209 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.16■□□□□ 0.5
Pdlim3O70209 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim3O70209 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.16■□□□□ 0.5
Pdlim3O70209 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pdlim3O70209 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pdlim3O70209 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pdlim3O70209 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pdlim3O70209 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pdlim3O70209 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pdlim3O70209 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim3O70209 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim3O70209 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pdlim3O70209 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.13■□□□□ 0.49
Pdlim3O70209 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pdlim3O70209 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.13■□□□□ 0.49
Pdlim3O70209 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms