Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx3O70137 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx3O70137 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx3O70137 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx3O70137 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx3O70137 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alx3O70137 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx3O70137 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx3O70137 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx3O70137 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx3O70137 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alx3O70137 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Alx3O70137 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx3O70137 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx3O70137 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Alx3O70137 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx3O70137 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alx3O70137 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.18■□□□□ 0.5
Alx3O70137 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.18■□□□□ 0.5
Alx3O70137 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Alx3O70137 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.18■□□□□ 0.5
Alx3O70137 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.18■□□□□ 0.5
Alx3O70137 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx3O70137 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.17■□□□□ 0.5
Alx3O70137 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Alx3O70137 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Alx3O70137 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx3O70137 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alx3O70137 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Alx3O70137 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Alx3O70137 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alx3O70137 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Alx3O70137 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Alx3O70137 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Alx3O70137 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Alx3O70137 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alx3O70137 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Alx3O70137 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Alx3O70137 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Alx3O70137 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Alx3O70137 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.14■□□□□ 0.49
Alx3O70137 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Alx3O70137 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.14■□□□□ 0.49
Alx3O70137 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alx3O70137 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alx3O70137 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alx3O70137 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Alx3O70137 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alx3O70137 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Alx3O70137 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.13■□□□□ 0.49
Alx3O70137 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.13■□□□□ 0.49
Alx3O70137 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Alx3O70137 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.13■□□□□ 0.49
Alx3O70137 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.13■□□□□ 0.49
Alx3O70137 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alx3O70137 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.12■□□□□ 0.49
Alx3O70137 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.12■□□□□ 0.49
Alx3O70137 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.12■□□□□ 0.49
Alx3O70137 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Alx3O70137 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Alx3O70137 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Alx3O70137 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms