Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rdh5O55240 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
Rdh5O55240 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.04■□□□□ 0.64
Rdh5O55240 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.04■□□□□ 0.64
Rdh5O55240 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rdh5O55240 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.04■□□□□ 0.64
Rdh5O55240 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rdh5O55240 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Rdh5O55240 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh5O55240 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh5O55240 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
Rdh5O55240 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh5O55240 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh5O55240 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.03■□□□□ 0.64
Rdh5O55240 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.03■□□□□ 0.64
Rdh5O55240 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh5O55240 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rdh5O55240 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh5O55240 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh5O55240 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh5O55240 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh5O55240 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.02■□□□□ 0.64
Rdh5O55240 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh5O55240 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Rdh5O55240 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh5O55240 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh5O55240 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.02■□□□□ 0.64
Rdh5O55240 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rdh5O55240 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.02■□□□□ 0.64
Rdh5O55240 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rdh5O55240 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rdh5O55240 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.01■□□□□ 0.63
Rdh5O55240 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.01■□□□□ 0.63
Rdh5O55240 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.01■□□□□ 0.63
Rdh5O55240 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rdh5O55240 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh5O55240 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh5O55240 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh5O55240 Gm10657-201ENSMUST00000193528 1031 ntBASIC19■□□□□ 0.63
Rdh5O55240 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Rdh5O55240 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rdh5O55240 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rdh5O55240 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rdh5O55240 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19■□□□□ 0.63
Rdh5O55240 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19■□□□□ 0.63
Rdh5O55240 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh5O55240 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Rdh5O55240 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh5O55240 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.99■□□□□ 0.63
Rdh5O55240 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh5O55240 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh5O55240 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh5O55240 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh5O55240 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.99■□□□□ 0.63
Rdh5O55240 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rdh5O55240 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh5O55240 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh5O55240 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh5O55240 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Rdh5O55240 Gm13241-201ENSMUST00000094493 780 ntBASIC18.98■□□□□ 0.63
Rdh5O55240 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh5O55240 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh5O55240 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rdh5O55240 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh5O55240 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh5O55240 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.97■□□□□ 0.63
Rdh5O55240 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh5O55240 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh5O55240 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh5O55240 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rdh5O55240 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh5O55240 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.96■□□□□ 0.63
Rdh5O55240 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rdh5O55240 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh5O55240 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh5O55240 Gm43530-201ENSMUST00000195920 274 ntBASIC18.96■□□□□ 0.63
Rdh5O55240 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rdh5O55240 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms