Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Iqck-206ENSMUST00000208658 2891 ntBASIC21.32■■□□□ 1
Pja1O55176 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pja1O55176 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pja1O55176 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pja1O55176 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pja1O55176 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pja1O55176 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pja1O55176 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pja1O55176 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.31■■□□□ 1
Pja1O55176 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pja1O55176 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.31■■□□□ 1
Pja1O55176 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pja1O55176 Gm10399-202ENSMUST00000202768 748 ntBASIC21.31■■□□□ 1
Pja1O55176 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pja1O55176 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pja1O55176 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.31■■□□□ 1
Pja1O55176 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pja1O55176 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pja1O55176 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Pja1O55176 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Pja1O55176 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Pja1O55176 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pja1O55176 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pja1O55176 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pja1O55176 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pja1O55176 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pja1O55176 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.29■■□□□ 1
Pja1O55176 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pja1O55176 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.29■■□□□ 1
Pja1O55176 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pja1O55176 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pja1O55176 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pja1O55176 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pja1O55176 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.29■■□□□ 1
Pja1O55176 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pja1O55176 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pja1O55176 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.28■■□□□ 1
Pja1O55176 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pja1O55176 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pja1O55176 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.28■■□□□ 1
Pja1O55176 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pja1O55176 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pja1O55176 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pja1O55176 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pja1O55176 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pja1O55176 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pja1O55176 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pja1O55176 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.27■■□□□ 1
Pja1O55176 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pja1O55176 Gm5921-201ENSMUST00000075898 882 ntBASIC21.27■■□□□ 1
Pja1O55176 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pja1O55176 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pja1O55176 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pja1O55176 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pja1O55176 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pja1O55176 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pja1O55176 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pja1O55176 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pja1O55176 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pja1O55176 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Pja1O55176 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.26■□□□□ 0.99
Pja1O55176 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.26■□□□□ 0.99
Pja1O55176 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pja1O55176 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.26■□□□□ 0.99
Pja1O55176 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pja1O55176 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.26■□□□□ 0.99
Pja1O55176 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pja1O55176 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pja1O55176 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pja1O55176 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.25■□□□□ 0.99
Pja1O55176 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pja1O55176 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pja1O55176 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.25■□□□□ 0.99
Pja1O55176 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pja1O55176 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pja1O55176 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.24■□□□□ 0.99
Pja1O55176 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pja1O55176 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pja1O55176 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pja1O55176 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.24■□□□□ 0.99
Pja1O55176 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pja1O55176 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pja1O55176 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pja1O55176 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pja1O55176 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pja1O55176 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Pja1O55176 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pja1O55176 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pja1O55176 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Pja1O55176 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Pja1O55176 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pja1O55176 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pja1O55176 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pja1O55176 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pja1O55176 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pja1O55176 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pja1O55176 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pja1O55176 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.21■□□□□ 0.99
Pja1O55176 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.21■□□□□ 0.99
Pja1O55176 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms