Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DffbO54788 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DffbO54788 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DffbO54788 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.23■□□□□ 0.35
DffbO54788 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DffbO54788 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DffbO54788 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DffbO54788 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.23■□□□□ 0.35
DffbO54788 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DffbO54788 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DffbO54788 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DffbO54788 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DffbO54788 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.22■□□□□ 0.35
DffbO54788 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DffbO54788 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DffbO54788 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
DffbO54788 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DffbO54788 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.22■□□□□ 0.35
DffbO54788 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DffbO54788 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DffbO54788 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DffbO54788 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.21■□□□□ 0.35
DffbO54788 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DffbO54788 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DffbO54788 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DffbO54788 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DffbO54788 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DffbO54788 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DffbO54788 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DffbO54788 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
DffbO54788 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
DffbO54788 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DffbO54788 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.2■□□□□ 0.34
DffbO54788 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DffbO54788 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DffbO54788 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DffbO54788 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DffbO54788 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DffbO54788 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DffbO54788 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
DffbO54788 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DffbO54788 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DffbO54788 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.18■□□□□ 0.34
DffbO54788 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
DffbO54788 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
DffbO54788 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.18■□□□□ 0.34
DffbO54788 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.18■□□□□ 0.34
DffbO54788 Gm45444-201ENSMUST00000211394 898 ntBASIC17.18■□□□□ 0.34
DffbO54788 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DffbO54788 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DffbO54788 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
DffbO54788 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DffbO54788 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
DffbO54788 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DffbO54788 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DffbO54788 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DffbO54788 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DffbO54788 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
DffbO54788 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.17■□□□□ 0.34
DffbO54788 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
DffbO54788 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DffbO54788 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DffbO54788 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
DffbO54788 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DffbO54788 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.16■□□□□ 0.34
DffbO54788 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.16■□□□□ 0.34
DffbO54788 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.16■□□□□ 0.34
DffbO54788 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DffbO54788 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
DffbO54788 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.16■□□□□ 0.34
DffbO54788 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
DffbO54788 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DffbO54788 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DffbO54788 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DffbO54788 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
DffbO54788 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DffbO54788 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.15■□□□□ 0.34
DffbO54788 Gm13238-201ENSMUST00000117655 780 ntBASIC17.15■□□□□ 0.34
DffbO54788 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.15■□□□□ 0.34
DffbO54788 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
DffbO54788 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.15■□□□□ 0.34
DffbO54788 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms