Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh2d1bO35324 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.85■□□□□ 0.61
Sh2d1bO35324 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sh2d1bO35324 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.85■□□□□ 0.61
Sh2d1bO35324 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Sh2d1bO35324 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sh2d1bO35324 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh2d1bO35324 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Sh2d1bO35324 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d1bO35324 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Sh2d1bO35324 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.84■□□□□ 0.61
Sh2d1bO35324 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sh2d1bO35324 Gm40848-201ENSMUST00000221998 324 ntBASIC18.84■□□□□ 0.61
Sh2d1bO35324 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh2d1bO35324 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.84■□□□□ 0.61
Sh2d1bO35324 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Sh2d1bO35324 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d1bO35324 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d1bO35324 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d1bO35324 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d1bO35324 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d1bO35324 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Sh2d1bO35324 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d1bO35324 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh2d1bO35324 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh2d1bO35324 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh2d1bO35324 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Sh2d1bO35324 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh2d1bO35324 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh2d1bO35324 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sh2d1bO35324 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d1bO35324 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d1bO35324 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sh2d1bO35324 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sh2d1bO35324 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sh2d1bO35324 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh2d1bO35324 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1bO35324 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh2d1bO35324 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d1bO35324 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d1bO35324 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d1bO35324 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sh2d1bO35324 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
Sh2d1bO35324 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d1bO35324 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sh2d1bO35324 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.79■□□□□ 0.6
Sh2d1bO35324 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.79■□□□□ 0.6
Sh2d1bO35324 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sh2d1bO35324 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sh2d1bO35324 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d1bO35324 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.77■□□□□ 0.6
Sh2d1bO35324 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d1bO35324 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.77■□□□□ 0.6
Sh2d1bO35324 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.77■□□□□ 0.6
Sh2d1bO35324 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d1bO35324 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sh2d1bO35324 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sh2d1bO35324 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Sh2d1bO35324 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d1bO35324 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d1bO35324 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d1bO35324 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d1bO35324 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d1bO35324 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d1bO35324 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.76■□□□□ 0.59
Sh2d1bO35324 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.76■□□□□ 0.59
Sh2d1bO35324 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.76■□□□□ 0.59
Sh2d1bO35324 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d1bO35324 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sh2d1bO35324 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d1bO35324 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d1bO35324 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sh2d1bO35324 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sh2d1bO35324 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms