Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col15a1O35206 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Col15a1O35206 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC26.24■■□□□ 1.79
Col15a1O35206 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC26.24■■□□□ 1.79
Col15a1O35206 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col15a1O35206 Gm42778-201ENSMUST00000199644 553 ntBASIC26.23■■□□□ 1.79
Col15a1O35206 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC26.23■■□□□ 1.79
Col15a1O35206 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col15a1O35206 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col15a1O35206 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col15a1O35206 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col15a1O35206 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col15a1O35206 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Col15a1O35206 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC26.22■■□□□ 1.79
Col15a1O35206 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.22■■□□□ 1.79
Col15a1O35206 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Col15a1O35206 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col15a1O35206 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col15a1O35206 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col15a1O35206 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Col15a1O35206 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
Col15a1O35206 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Col15a1O35206 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
Col15a1O35206 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC26.2■■□□□ 1.79
Col15a1O35206 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col15a1O35206 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col15a1O35206 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC26.2■■□□□ 1.78
Col15a1O35206 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC26.2■■□□□ 1.78
Col15a1O35206 Mir6236-201ENSMUST00000184437 123 ntBASIC26.2■■□□□ 1.78
Col15a1O35206 AC137127.1-201ENSMUST00000213466 1078 ntBASIC26.2■■□□□ 1.78
Col15a1O35206 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col15a1O35206 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col15a1O35206 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC26.19■■□□□ 1.78
Col15a1O35206 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col15a1O35206 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.19■■□□□ 1.78
Col15a1O35206 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.19■■□□□ 1.78
Col15a1O35206 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC26.19■■□□□ 1.78
Col15a1O35206 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC26.19■■□□□ 1.78
Col15a1O35206 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col15a1O35206 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Col15a1O35206 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col15a1O35206 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col15a1O35206 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC26.18■■□□□ 1.78
Col15a1O35206 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col15a1O35206 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC26.18■■□□□ 1.78
Col15a1O35206 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.18■■□□□ 1.78
Col15a1O35206 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col15a1O35206 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col15a1O35206 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col15a1O35206 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col15a1O35206 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Col15a1O35206 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col15a1O35206 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC26.16■■□□□ 1.78
Col15a1O35206 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC26.16■■□□□ 1.78
Col15a1O35206 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col15a1O35206 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col15a1O35206 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col15a1O35206 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col15a1O35206 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC26.15■■□□□ 1.78
Col15a1O35206 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Col15a1O35206 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col15a1O35206 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col15a1O35206 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Col15a1O35206 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col15a1O35206 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.14■■□□□ 1.78
Col15a1O35206 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Col15a1O35206 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col15a1O35206 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC26.14■■□□□ 1.78
Col15a1O35206 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col15a1O35206 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col15a1O35206 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC26.14■■□□□ 1.78
Col15a1O35206 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Col15a1O35206 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Col15a1O35206 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC26.13■■□□□ 1.77
Col15a1O35206 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Col15a1O35206 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
Col15a1O35206 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col15a1O35206 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC26.13■■□□□ 1.77
Col15a1O35206 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col15a1O35206 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Col15a1O35206 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
Col15a1O35206 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC26.12■■□□□ 1.77
Col15a1O35206 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col15a1O35206 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col15a1O35206 Gm9988-201ENSMUST00000069786 435 ntBASIC26.12■■□□□ 1.77
Col15a1O35206 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col15a1O35206 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col15a1O35206 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Col15a1O35206 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC26.11■■□□□ 1.77
Col15a1O35206 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col15a1O35206 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col15a1O35206 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms