Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx4O35137 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx4O35137 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx4O35137 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Alx4O35137 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Alx4O35137 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx4O35137 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx4O35137 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.94■□□□□ 0.46
Alx4O35137 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Alx4O35137 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx4O35137 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Alx4O35137 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Alx4O35137 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Alx4O35137 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.93■□□□□ 0.46
Alx4O35137 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Alx4O35137 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Alx4O35137 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.93■□□□□ 0.46
Alx4O35137 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.92■□□□□ 0.46
Alx4O35137 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.92■□□□□ 0.46
Alx4O35137 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx4O35137 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Alx4O35137 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx4O35137 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx4O35137 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Alx4O35137 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Alx4O35137 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Alx4O35137 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Alx4O35137 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Mir6538-201ENSMUST00000183713 110 ntBASIC17.91■□□□□ 0.46
Alx4O35137 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Alx4O35137 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx4O35137 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.9■□□□□ 0.46
Alx4O35137 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.9■□□□□ 0.46
Alx4O35137 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx4O35137 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx4O35137 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx4O35137 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Alx4O35137 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx4O35137 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Alx4O35137 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Alx4O35137 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Alx4O35137 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Alx4O35137 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.89■□□□□ 0.46
Alx4O35137 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Alx4O35137 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx4O35137 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx4O35137 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Alx4O35137 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx4O35137 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Alx4O35137 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Alx4O35137 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.89■□□□□ 0.45
Alx4O35137 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Alx4O35137 Gm45444-201ENSMUST00000211394 898 ntBASIC17.89■□□□□ 0.45
Alx4O35137 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Alx4O35137 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.89■□□□□ 0.45
Alx4O35137 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.88■□□□□ 0.45
Alx4O35137 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.88■□□□□ 0.45
Alx4O35137 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.88■□□□□ 0.45
Alx4O35137 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Alx4O35137 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.87■□□□□ 0.45
Alx4O35137 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Alx4O35137 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx4O35137 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx4O35137 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Alx4O35137 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Alx4O35137 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx4O35137 Gm10399-202ENSMUST00000202768 748 ntBASIC17.87■□□□□ 0.45
Alx4O35137 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Alx4O35137 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms