Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gfra3O35118 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gfra3O35118 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gfra3O35118 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.37■□□□□ 0.37
Gfra3O35118 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gfra3O35118 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.37■□□□□ 0.37
Gfra3O35118 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gfra3O35118 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gfra3O35118 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gfra3O35118 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gfra3O35118 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.36■□□□□ 0.37
Gfra3O35118 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gfra3O35118 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gfra3O35118 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gfra3O35118 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.35■□□□□ 0.37
Gfra3O35118 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.35■□□□□ 0.37
Gfra3O35118 Mir7075-201ENSMUST00000184187 82 ntBASIC17.35■□□□□ 0.37
Gfra3O35118 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gfra3O35118 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gfra3O35118 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gfra3O35118 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gfra3O35118 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.34■□□□□ 0.37
Gfra3O35118 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gfra3O35118 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gfra3O35118 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gfra3O35118 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gfra3O35118 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Gfra3O35118 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Gfra3O35118 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gfra3O35118 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gfra3O35118 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Gfra3O35118 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.33■□□□□ 0.36
Gfra3O35118 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gfra3O35118 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gfra3O35118 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.33■□□□□ 0.36
Gfra3O35118 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Gfra3O35118 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.33■□□□□ 0.36
Gfra3O35118 Gm6139-201ENSMUST00000079261 882 ntBASIC17.33■□□□□ 0.36
Gfra3O35118 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gfra3O35118 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gfra3O35118 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gfra3O35118 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Gfra3O35118 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Gfra3O35118 Serp2-204ENSMUST00000228055 705 ntBASIC17.32■□□□□ 0.36
Gfra3O35118 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gfra3O35118 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Gfra3O35118 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfra3O35118 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfra3O35118 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gfra3O35118 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gfra3O35118 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gfra3O35118 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gfra3O35118 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
Gfra3O35118 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gfra3O35118 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfra3O35118 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfra3O35118 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gfra3O35118 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.3■□□□□ 0.36
Gfra3O35118 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfra3O35118 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.3■□□□□ 0.36
Gfra3O35118 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gfra3O35118 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfra3O35118 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfra3O35118 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gfra3O35118 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.3■□□□□ 0.36
Gfra3O35118 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.3■□□□□ 0.36
Gfra3O35118 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfra3O35118 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfra3O35118 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gfra3O35118 Gm12251-201ENSMUST00000117893 792 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms