Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pkd1O08852 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pkd1O08852 Gm7977-201ENSMUST00000193787 748 ntBASIC13.06□□□□□ -0.32
Pkd1O08852 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pkd1O08852 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pkd1O08852 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pkd1O08852 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Pkd1O08852 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.05□□□□□ -0.32
Pkd1O08852 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pkd1O08852 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Gm20760-201ENSMUST00000179197 648 ntBASIC13.05□□□□□ -0.32
Pkd1O08852 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.05□□□□□ -0.32
Pkd1O08852 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.05□□□□□ -0.32
Pkd1O08852 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.05□□□□□ -0.32
Pkd1O08852 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pkd1O08852 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pkd1O08852 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pkd1O08852 Mir5133-201ENSMUST00000174955 77 ntBASIC13.04□□□□□ -0.32
Pkd1O08852 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.04□□□□□ -0.32
Pkd1O08852 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pkd1O08852 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pkd1O08852 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pkd1O08852 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pkd1O08852 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pkd1O08852 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pkd1O08852 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.03□□□□□ -0.32
Pkd1O08852 Gm20049-201ENSMUST00000219950 730 ntBASIC13.03□□□□□ -0.32
Pkd1O08852 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pkd1O08852 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pkd1O08852 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pkd1O08852 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pkd1O08852 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.03□□□□□ -0.32
Pkd1O08852 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC13.03□□□□□ -0.32
Pkd1O08852 Gm9988-201ENSMUST00000069786 435 ntBASIC13.03□□□□□ -0.32
Pkd1O08852 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pkd1O08852 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pkd1O08852 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pkd1O08852 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pkd1O08852 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Pkd1O08852 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pkd1O08852 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pkd1O08852 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Pkd1O08852 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pkd1O08852 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pkd1O08852 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pkd1O08852 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.02□□□□□ -0.33
Pkd1O08852 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkd1O08852 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkd1O08852 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.01□□□□□ -0.33
Pkd1O08852 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkd1O08852 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkd1O08852 Gm13168-201ENSMUST00000121771 632 ntBASIC13.01□□□□□ -0.33
Pkd1O08852 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkd1O08852 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkd1O08852 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkd1O08852 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pkd1O08852 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.01□□□□□ -0.33
Pkd1O08852 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pkd1O08852 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pkd1O08852 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13□□□□□ -0.33
Pkd1O08852 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 AC135637.1-201ENSMUST00000227750 365 ntBASIC13□□□□□ -0.33
Pkd1O08852 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pkd1O08852 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pkd1O08852 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pkd1O08852 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pkd1O08852 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkd1O08852 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pkd1O08852 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkd1O08852 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkd1O08852 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.99□□□□□ -0.33
Pkd1O08852 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.99□□□□□ -0.33
Pkd1O08852 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pkd1O08852 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pkd1O08852 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pkd1O08852 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pkd1O08852 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.99□□□□□ -0.33
Pkd1O08852 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms