Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ebf3O08791 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Ebf3O08791 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf3O08791 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf3O08791 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf3O08791 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.85■□□□□ 0.93
Ebf3O08791 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.85■□□□□ 0.93
Ebf3O08791 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.85■□□□□ 0.93
Ebf3O08791 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf3O08791 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf3O08791 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf3O08791 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf3O08791 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ebf3O08791 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.84■□□□□ 0.93
Ebf3O08791 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ebf3O08791 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ebf3O08791 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.84■□□□□ 0.93
Ebf3O08791 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ebf3O08791 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ebf3O08791 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ebf3O08791 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ebf3O08791 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ebf3O08791 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.82■□□□□ 0.92
Ebf3O08791 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf3O08791 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf3O08791 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf3O08791 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf3O08791 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf3O08791 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf3O08791 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ebf3O08791 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf3O08791 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ebf3O08791 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf3O08791 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf3O08791 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf3O08791 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.81■□□□□ 0.92
Ebf3O08791 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf3O08791 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.81■□□□□ 0.92
Ebf3O08791 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf3O08791 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ebf3O08791 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
Ebf3O08791 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ebf3O08791 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ebf3O08791 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf3O08791 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ebf3O08791 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.81■□□□□ 0.92
Ebf3O08791 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ebf3O08791 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf3O08791 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf3O08791 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf3O08791 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ebf3O08791 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf3O08791 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.8■□□□□ 0.92
Ebf3O08791 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf3O08791 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.8■□□□□ 0.92
Ebf3O08791 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.8■□□□□ 0.92
Ebf3O08791 Spcs1-204ENSMUST00000226782 949 ntBASIC20.8■□□□□ 0.92
Ebf3O08791 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf3O08791 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ebf3O08791 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf3O08791 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf3O08791 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf3O08791 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf3O08791 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
Ebf3O08791 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf3O08791 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Ebf3O08791 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf3O08791 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf3O08791 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ebf3O08791 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.79■□□□□ 0.92
Ebf3O08791 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf3O08791 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf3O08791 Gm26833-201ENSMUST00000180899 440 ntBASIC20.78■□□□□ 0.92
Ebf3O08791 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Ebf3O08791 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ebf3O08791 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ebf3O08791 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf3O08791 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf3O08791 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf3O08791 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.77■□□□□ 0.92
Ebf3O08791 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf3O08791 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf3O08791 Gm29257-201ENSMUST00000186115 639 ntBASIC20.77■□□□□ 0.92
Ebf3O08791 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf3O08791 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf3O08791 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.77■□□□□ 0.92
Ebf3O08791 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.77■□□□□ 0.92
Ebf3O08791 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ebf3O08791 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Ebf3O08791 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ebf3O08791 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ebf3O08791 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.76■□□□□ 0.91
Ebf3O08791 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf3O08791 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.76■□□□□ 0.91
Ebf3O08791 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ebf3O08791 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf3O08791 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf3O08791 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf3O08791 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ebf3O08791 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms