Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm3139J3QK78 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Gm3139J3QK78 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3139J3QK78 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3139J3QK78 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3139J3QK78 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3139J3QK78 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Gm3139J3QK78 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.12■□□□□ 0.81
Gm3139J3QK78 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Gm3139J3QK78 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm3139J3QK78 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3139J3QK78 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.11■□□□□ 0.81
Gm3139J3QK78 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3139J3QK78 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3139J3QK78 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3139J3QK78 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3139J3QK78 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.11■□□□□ 0.81
Gm3139J3QK78 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Gm3139J3QK78 Gm6139-201ENSMUST00000079261 882 ntBASIC20.11■□□□□ 0.81
Gm3139J3QK78 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3139J3QK78 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm3139J3QK78 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.1■□□□□ 0.81
Gm3139J3QK78 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Gm3139J3QK78 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3139J3QK78 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm3139J3QK78 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3139J3QK78 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gm3139J3QK78 Gm8493-201ENSMUST00000196881 489 ntBASIC20.08■□□□□ 0.81
Gm3139J3QK78 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.08■□□□□ 0.81
Gm3139J3QK78 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gm3139J3QK78 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm3139J3QK78 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm3139J3QK78 Spcs1-204ENSMUST00000226782 949 ntBASIC20.06■□□□□ 0.8
Gm3139J3QK78 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3139J3QK78 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3139J3QK78 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm3139J3QK78 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.05■□□□□ 0.8
Gm3139J3QK78 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm3139J3QK78 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3139J3QK78 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Gm3139J3QK78 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Gm3139J3QK78 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3139J3QK78 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm3139J3QK78 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.04■□□□□ 0.8
Gm3139J3QK78 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gm3139J3QK78 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gm3139J3QK78 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3139J3QK78 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.03■□□□□ 0.8
Gm3139J3QK78 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3139J3QK78 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm3139J3QK78 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gm3139J3QK78 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.02■□□□□ 0.8
Gm3139J3QK78 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm3139J3QK78 Gm12251-201ENSMUST00000117893 792 ntBASIC20.02■□□□□ 0.8
Gm3139J3QK78 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms