Protein–RNA interactions for Protein: J3KMS6

Gm21818, MCG122238, isoform CRA_a, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21818J3KMS6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21818J3KMS6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gm21818J3KMS6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
Gm21818J3KMS6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21818J3KMS6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm21818J3KMS6 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm21818J3KMS6 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm21818J3KMS6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm21818J3KMS6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm21818J3KMS6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Gm45444-201ENSMUST00000211394 898 ntBASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm21818J3KMS6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm21818J3KMS6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gm21818J3KMS6 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.1■□□□□ 0.33
Gm21818J3KMS6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21818J3KMS6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.1■□□□□ 0.33
Gm21818J3KMS6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm21818J3KMS6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm21818J3KMS6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm21818J3KMS6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm21818J3KMS6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm21818J3KMS6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm21818J3KMS6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm21818J3KMS6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Gm21818J3KMS6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm21818J3KMS6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm21818J3KMS6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm21818J3KMS6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm21818J3KMS6 Gm43566-201ENSMUST00000196851 808 ntBASIC17.08■□□□□ 0.32
Gm21818J3KMS6 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.08■□□□□ 0.32
Gm21818J3KMS6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm21818J3KMS6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm21818J3KMS6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm21818J3KMS6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm21818J3KMS6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms