Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Atf6F6VAN0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6F6VAN0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.66■□□□□ 0.9
Atf6F6VAN0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.66■□□□□ 0.9
Atf6F6VAN0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6F6VAN0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Atf6F6VAN0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6F6VAN0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Atf6F6VAN0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6F6VAN0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.65■□□□□ 0.9
Atf6F6VAN0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6F6VAN0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Atf6F6VAN0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atf6F6VAN0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atf6F6VAN0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Atf6F6VAN0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf6F6VAN0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Atf6F6VAN0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf6F6VAN0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.64■□□□□ 0.89
Atf6F6VAN0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf6F6VAN0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Atf6F6VAN0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf6F6VAN0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Atf6F6VAN0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.64■□□□□ 0.89
Atf6F6VAN0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Atf6F6VAN0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.62■□□□□ 0.89
Atf6F6VAN0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.62■□□□□ 0.89
Atf6F6VAN0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf6F6VAN0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atf6F6VAN0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
Atf6F6VAN0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.61■□□□□ 0.89
Atf6F6VAN0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.61■□□□□ 0.89
Atf6F6VAN0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Atf6F6VAN0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf6F6VAN0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atf6F6VAN0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atf6F6VAN0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6F6VAN0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6F6VAN0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6F6VAN0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.58■□□□□ 0.89
Atf6F6VAN0 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.58■□□□□ 0.89
Atf6F6VAN0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.58■□□□□ 0.89
Atf6F6VAN0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atf6F6VAN0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atf6F6VAN0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atf6F6VAN0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atf6F6VAN0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf6F6VAN0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf6F6VAN0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf6F6VAN0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atf6F6VAN0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.57■□□□□ 0.88
Atf6F6VAN0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms