Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Zc3h13E9Q784 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Zc3h13E9Q784 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Zc3h13E9Q784 AC158538.1-201ENSMUST00000225870 294 ntBASIC28.43■■■□□ 2.14
Zc3h13E9Q784 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Zc3h13E9Q784 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Zc3h13E9Q784 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Zc3h13E9Q784 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.43■■■□□ 2.14
Zc3h13E9Q784 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Zc3h13E9Q784 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Zc3h13E9Q784 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC28.43■■■□□ 2.14
Zc3h13E9Q784 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC28.43■■■□□ 2.14
Zc3h13E9Q784 Gm7977-201ENSMUST00000193787 748 ntBASIC28.42■■■□□ 2.14
Zc3h13E9Q784 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Zc3h13E9Q784 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Zc3h13E9Q784 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Zc3h13E9Q784 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Zc3h13E9Q784 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Zc3h13E9Q784 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
Zc3h13E9Q784 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC28.41■■■□□ 2.14
Zc3h13E9Q784 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Zc3h13E9Q784 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Zc3h13E9Q784 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC28.4■■■□□ 2.14
Zc3h13E9Q784 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Zc3h13E9Q784 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC28.4■■■□□ 2.14
Zc3h13E9Q784 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Zc3h13E9Q784 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Zc3h13E9Q784 Gm12527-201ENSMUST00000117967 564 ntBASIC28.39■■■□□ 2.14
Zc3h13E9Q784 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Zc3h13E9Q784 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC28.39■■■□□ 2.14
Zc3h13E9Q784 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC28.39■■■□□ 2.14
Zc3h13E9Q784 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
Zc3h13E9Q784 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Zc3h13E9Q784 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC28.38■■■□□ 2.13
Zc3h13E9Q784 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Ap3s1-204ENSMUST00000225520 957 ntBASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Zc3h13E9Q784 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
Zc3h13E9Q784 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC28.36■■■□□ 2.13
Zc3h13E9Q784 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC28.36■■■□□ 2.13
Zc3h13E9Q784 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Zc3h13E9Q784 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Zc3h13E9Q784 Gm27801-201ENSMUST00000184174 223 ntBASIC28.35■■■□□ 2.13
Zc3h13E9Q784 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC28.35■■■□□ 2.13
Zc3h13E9Q784 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Zc3h13E9Q784 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Zc3h13E9Q784 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC28.35■■■□□ 2.13
Zc3h13E9Q784 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Zc3h13E9Q784 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Zc3h13E9Q784 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC28.34■■■□□ 2.13
Zc3h13E9Q784 Gm8520-201ENSMUST00000186517 868 ntBASIC28.34■■■□□ 2.13
Zc3h13E9Q784 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Zc3h13E9Q784 Gm13234-201ENSMUST00000120010 747 ntBASIC28.33■■■□□ 2.13
Zc3h13E9Q784 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC28.33■■■□□ 2.13
Zc3h13E9Q784 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Zc3h13E9Q784 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Zc3h13E9Q784 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Zc3h13E9Q784 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC28.32■■■□□ 2.12
Zc3h13E9Q784 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Zc3h13E9Q784 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Zc3h13E9Q784 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Zc3h13E9Q784 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC28.32■■■□□ 2.12
Zc3h13E9Q784 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Zc3h13E9Q784 Mir5133-201ENSMUST00000174955 77 ntBASIC28.32■■■□□ 2.12
Zc3h13E9Q784 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Zc3h13E9Q784 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Zc3h13E9Q784 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Zc3h13E9Q784 AC137127.1-201ENSMUST00000213466 1078 ntBASIC28.31■■■□□ 2.12
Zc3h13E9Q784 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC28.31■■■□□ 2.12
Zc3h13E9Q784 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Zc3h13E9Q784 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Zc3h13E9Q784 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Zc3h13E9Q784 AC135963.1-201ENSMUST00000211640 717 ntBASIC28.29■■■□□ 2.12
Zc3h13E9Q784 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Zc3h13E9Q784 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Zc3h13E9Q784 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Zc3h13E9Q784 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Zc3h13E9Q784 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC28.29■■■□□ 2.12
Zc3h13E9Q784 Gm5913-201ENSMUST00000119397 1399 ntBASIC28.29■■■□□ 2.12
Zc3h13E9Q784 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Zc3h13E9Q784 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Zc3h13E9Q784 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
Zc3h13E9Q784 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms