Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm8495-201ENSMUST00000188740 694 ntBASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh17E9PXF0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh17E9PXF0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh17E9PXF0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh17E9PXF0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdh17E9PXF0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh17E9PXF0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdh17E9PXF0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh17E9PXF0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh17E9PXF0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh17E9PXF0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh17E9PXF0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh17E9PXF0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh17E9PXF0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh17E9PXF0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh17E9PXF0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh17E9PXF0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh17E9PXF0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh17E9PXF0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh17E9PXF0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Spcs1-204ENSMUST00000226782 949 ntBASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh17E9PXF0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh17E9PXF0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh17E9PXF0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh17E9PXF0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms