Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Dchs1E9PVD3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Mir7071-201ENSMUST00000184847 69 ntBASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Dchs1E9PVD3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dchs1E9PVD3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.06■□□□□ 0.48
Dchs1E9PVD3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Dchs1E9PVD3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Dchs1E9PVD3 Gm7977-201ENSMUST00000193787 748 ntBASIC18.06■□□□□ 0.48
Dchs1E9PVD3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dchs1E9PVD3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dchs1E9PVD3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dchs1E9PVD3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Dchs1E9PVD3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dchs1E9PVD3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Dchs1E9PVD3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.05■□□□□ 0.48
Dchs1E9PVD3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dchs1E9PVD3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Dchs1E9PVD3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Dchs1E9PVD3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dchs1E9PVD3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
Dchs1E9PVD3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dchs1E9PVD3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dchs1E9PVD3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dchs1E9PVD3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dchs1E9PVD3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.02■□□□□ 0.48
Dchs1E9PVD3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.02■□□□□ 0.48
Dchs1E9PVD3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dchs1E9PVD3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Dchs1E9PVD3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dchs1E9PVD3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dchs1E9PVD3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.02■□□□□ 0.47
Dchs1E9PVD3 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.02■□□□□ 0.47
Dchs1E9PVD3 Gm12527-201ENSMUST00000117967 564 ntBASIC18.02■□□□□ 0.47
Dchs1E9PVD3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Dchs1E9PVD3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Dchs1E9PVD3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Dchs1E9PVD3 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.01■□□□□ 0.47
Dchs1E9PVD3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18■□□□□ 0.47
Dchs1E9PVD3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18■□□□□ 0.47
Dchs1E9PVD3 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Smad6-203ENSMUST00000179458 273 ntBASIC18■□□□□ 0.47
Dchs1E9PVD3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18■□□□□ 0.47
Dchs1E9PVD3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18■□□□□ 0.47
Dchs1E9PVD3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18■□□□□ 0.47
Dchs1E9PVD3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Dchs1E9PVD3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
Dchs1E9PVD3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Dchs1E9PVD3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dchs1E9PVD3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dchs1E9PVD3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dchs1E9PVD3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Dchs1E9PVD3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dchs1E9PVD3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms