Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Gm5640A3KG49 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm5640A3KG49 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Gm9806-201ENSMUST00000051080 552 ntBASIC20.36■□□□□ 0.85
Gm5640A3KG49 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.36■□□□□ 0.85
Gm5640A3KG49 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5640A3KG49 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5640A3KG49 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5640A3KG49 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm5640A3KG49 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Gm5640A3KG49 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Gm16437-201ENSMUST00000025669 507 ntBASIC20.34■□□□□ 0.85
Gm5640A3KG49 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm5640A3KG49 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5640A3KG49 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5640A3KG49 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Gm5640A3KG49 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5640A3KG49 Scarna2-201ENSMUST00000157560 414 ntBASIC20.33■□□□□ 0.85
Gm5640A3KG49 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.33■□□□□ 0.85
Gm5640A3KG49 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm5640A3KG49 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Gm5640A3KG49 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm5640A3KG49 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm5640A3KG49 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Gm5640A3KG49 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm5640A3KG49 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5640A3KG49 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Gm5640A3KG49 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5640A3KG49 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5640A3KG49 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5640A3KG49 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5640A3KG49 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm5640A3KG49 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gm5640A3KG49 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5640A3KG49 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5640A3KG49 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.29■□□□□ 0.84
Gm5640A3KG49 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5640A3KG49 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5640A3KG49 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5640A3KG49 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm5640A3KG49 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gm5640A3KG49 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm5640A3KG49 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Gm5640A3KG49 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Gm5640A3KG49 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.27■□□□□ 0.84
Gm5640A3KG49 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm5640A3KG49 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Gm5640A3KG49 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm5640A3KG49 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm5640A3KG49 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm5640A3KG49 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5640A3KG49 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.26■□□□□ 0.83
Gm5640A3KG49 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5640A3KG49 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5640A3KG49 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5640A3KG49 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm5640A3KG49 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms