Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-1A0N8R0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-1A0N8R0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-1A0N8R0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-1A0N8R0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav12d-1A0N8R0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-1A0N8R0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-1A0N8R0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12d-1A0N8R0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav12d-1A0N8R0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-1A0N8R0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav12d-1A0N8R0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12d-1A0N8R0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.17■□□□□ 0.18
Trav12d-1A0N8R0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12d-1A0N8R0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Mir6538-201ENSMUST00000183713 110 ntBASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12d-1A0N8R0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.14■□□□□ 0.18
Trav12d-1A0N8R0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12d-1A0N8R0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-1A0N8R0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-1A0N8R0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-1A0N8R0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav12d-1A0N8R0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-1A0N8R0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-1A0N8R0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12d-1A0N8R0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12d-1A0N8R0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms