Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc194A0A140LIT1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc194A0A140LIT1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ccdc194A0A140LIT1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc194A0A140LIT1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 Gm40881-201ENSMUST00000223397 166 ntBASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc194A0A140LIT1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc194A0A140LIT1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc194A0A140LIT1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc194A0A140LIT1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc194A0A140LIT1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc194A0A140LIT1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc194A0A140LIT1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc194A0A140LIT1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc194A0A140LIT1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc194A0A140LIT1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Gm7143-201ENSMUST00000222811 859 ntBASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc194A0A140LIT1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms